Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2850 ATGGCATCAGATAACAACTCACCATCTCTTGAGATATTAGTTCGACGGCCGGAAGAATGCTCACTATGGACTGGCCCACCATTCGAGAACGGTCAACCGAATATCAAACTTGATAAAGTTATTTGCTTGAATGCTAAATTCAGTGATGATGGATCTTTGCTTATGGTGGTCAAATCCAATTCTGTCATTACTATATATGATTGTAAGACTGCTAAAGAGATTAGGTCTTTTCAAGTTCCTAATCTTGTGGCGTCTGTTTTGTCGCCTCGCGGAACTTATTTGCAAACCTTTCAAAAACCTTCCGGGCCGCAAGATAAGAATGTGACTTTATGGAAGATTGAGACTGGTGATTCTATTTATCAACACTCTCAGAAGAATATGACAAGGGCCAATTGGCCGGCAATTCAATTCAGCTCTGATGAAGCTACTGCATGCCGCGTGCCAACTAATGAGGTGCAATTTTTTGACACTGGGGATTTTTCTAAAGGAGTTGTTTGTCGGTTAAGAGTTCCAGGAGTTGCTTCCGCTGAGCTTTCTATTTCACCTGCTTCTCATGTAGCTGCATTTGTTCCGGAATCCAAGGGGGTTCCTGCCAGTGTACAGATATTTGCTTGTGGAGATGCTTCCCAAACTCAACCTATGGCTCGACGGAGCTTTTTCCGATGTTCTACAACCCAACTTAAATGGAACCATGGTTCAACTGGACTTCTAATTGTGGTGCAGTCAGATGTTGATAAAACAAATCAGAGTTACTATGGAGAATCAAAGTTATACTACCTGACAACAGATGGGGTGCATGAAGGATTAGTGCCTCTTCGGAAAGAGGGGCCTATTCATGATGCTCAATGGTCAAATTCAGGCTCAGAGTTTGCTGTTGTGTATGGGTTTATGCCTGCCAAAGCAACTCTGTTTGACAAGAAGTGCAGACCTCTACTGGAGCTTGGAACTGGTCCTTACAACACTATTCGATGGAACCCAAAAGGGAAATTTTTATGTTTGGCTGGCTTCGGTAACTTGCCTGGTGATATGGTATTTTGGGATTACGTGGAAAGGAAACAGCTTGCATCAACCAAAGCTGAATGGTCTGTGTCAAGTGAATGGTCTCCAGATGGGTGCTATTTCATGACAGCAACAACAGCTCCAAGGCTTCAAGTTGATAATGGGATCAAGATTTTTCACTATAATGGGTCATTGTACTTCAAGCAGATGTTTGACAAGTTATACCAGGCTGATTGGAAACCAGAGTCACCAAGTAAGTTTGGTGACATCACTGAACTAATCAAGTCTCTAGACTCGATAAAACTTGAAGATAAAAAACCATCAGGTCAAGGACCAAAACCAACCCAAGTTTCTACAAAAGCCTCTTCTGCCAACCCAACTGCACAAAAACCTGCTGCATATCGTCCACCACATGCTAAGACTGCAGCTGCTATTCAGGCAGAGTTGTTAGGAGAGAGCTCGGCTGAGTCATTGAGCAAGAATGCTTTACGAAACAAGAAAAAGAGGGAGAAACAGAAGGAGAAAAAGGCTGCTGCAGACGCCAGTTCGTGA 1551 0.4307 MASDNNSPSLEILVRRPEECSLWTGPPFENGQPNIKLDKVICLNAKFSDDGSLLMVVKSNSVITIYDCKTAKEIRSFQVPNLVASVLSPRGTYLQTFQKPSGPQDKNVTLWKIETGDSIYQHSQKNMTRANWPAIQFSSDEATACRVPTNEVQFFDTGDFSKGVVCRLRVPGVASAELSISPASHVAAFVPESKGVPASVQIFACGDASQTQPMARRSFFRCSTTQLKWNHGSTGLLIVVQSDVDKTNQSYYGESKLYYLTTDGVHEGLVPLRKEGPIHDAQWSNSGSEFAVVYGFMPAKATLFDKKCRPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYVERKQLASTKAEWSVSSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKQMFDKLYQADWKPESPSKFGDITELIKSLDSIKLEDKKPSGQGPKPTQVSTKASSANPTAQKPAAYRPPHAKTAAAIQAELLGESSAESLSKNALRNKKKREKQKEKKAAADASS* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2850 516 Gene3D - 4 157 IPR015943 GO:0005515
Mtr4g2850 516 MobiDBLite consensus disorder prediction 487 516 - -
Mtr4g2850 516 MobiDBLite consensus disorder prediction 434 474 - -
Mtr4g2850 516 SUPERFAMILY DPP6 N-terminal domain-like 43 395 - -
Mtr4g2850 516 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 9 514 IPR011387 GO:0003743|GO:0006413
Mtr4g2850 516 MobiDBLite consensus disorder prediction 444 462 - -
Mtr4g2850 516 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
Mtr4g2850 516 PIRSF Transl_init_eIF2A 4 516 IPR011387 GO:0003743|GO:0006413
Mtr4g2850 516 Coils Coil 493 513 - -
Mtr4g2850 516 Gene3D - 173 423 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2850 51 418 Eukaryotic Initiation Factors Gene Family AT5G27640 23.618 3.62e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2850 K15026 - gmx:100811589 882.478