Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2835 ATGGGTTGTGTTGTTCCTGCAGAACTTAGTTTAGATTTAAGACCAACTTTCGTTCCCAAAACCATCGCTAATTTCCTCTTTCACCTTTCCACAATCCAAACCACCTCCGATAAACTCTCTAAACTCCATGATTTCCTCTCCAGACTCGAAGATGAACTCAATAAGATCGATGCTTTCAAACGTGAACTACCTCTCTCCATGCTCCTCTTAAACGACGCAATTTTGGTTTTGAAGGAGGAATTGGAAAAATGTACAAGTAAAAATTCTGTGCCAGTTTTGGAAGAGTTTATTCCTTTGAAGAAAGAGATTGATCAAAGTGAAGAGAATAAAAATAATGATAGAGACAAGAACAACAACAATGAATGCAGCAAAGATAAGAAGAATTGGATGAGTTCTGTTCAGTTATGGAATAACAACACAACAACTTCTAATAATAATGTCTCTGATCATCATCATCATCATAAACTTAATAAATTAGAAACAACCAAGAAAAGGGAGGAAGGACAATCTGTGACTGTAGCTGAAGACCTTTTTCAATCTTGTAGTAGTAATAGAAATGGAGGAAGTGCTTTTATGCCTTTTTCAGCGTATTCTTCTGTTCCTGTGACAACAGTGACATTATCAGCGCCTAAAGAAGAGAAGGAAGAACCTGTTAGGAATAGGCTCTCTTTTCTGACTCCTGAGGTGAAGAGTTTGAGAGAAGGATTTGGTTCGAGGGGATCAAGAAGCAGTTCTAACAGGGCAGTTTCGTCGTCGTCTCCTCCTACCGTGCAGCCGAGTTTGCGTGCTGCGCCGCTTCAGCCGCAGCAGACTTCTAGGAAACAGAGGAGATGCTGGTCACCGGAATTGCACCGGAGATTTGTTAATGCGTTGCAGAAGCTTGGAGGTTCTCAAGCAACTCCAAAGCAAATTAGAGAACTCATGCAAGTTGATGGCCTGACTAATGATGAAGTGAAGAGCCATTTGCAAAAATACCGACTTCATACGCGGAGAGTTCCAGCTGCAAGTGGTACTGATCAGTCTGTTGTAGTTCTTGGAGGTTTATGGATGCCTCAAGAACATTACAATGACTCTTCCAAAGGTAGCAGTACGGCGTCTGGTTCTCCACAGAGTCCACTTCATTTAGCTACAGGATCCCGGGGAGGGACATCACCAACTGAAGGTGATAGCATGGAAGATGACGATGATGAAAAATCCGAGAGTTATAGCTGGAAAAGTCATATTCACAGACATGGAAAAGTTGGTGTATAG 1251 0.4173 MGCVVPAELSLDLRPTFVPKTIANFLFHLSTIQTTSDKLSKLHDFLSRLEDELNKIDAFKRELPLSMLLLNDAILVLKEELEKCTSKNSVPVLEEFIPLKKEIDQSEENKNNDRDKNNNNECSKDKKNWMSSVQLWNNNTTTSNNNVSDHHHHHKLNKLETTKKREEGQSVTVAEDLFQSCSSNRNGGSAFMPFSAYSSVPVTTVTLSAPKEEKEEPVRNRLSFLTPEVKSLREGFGSRGSRSSSNRAVSSSSPPTVQPSLRAAPLQPQQTSRKQRRCWSPELHRRFVNALQKLGGSQATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPAASGTDQSVVVLGGLWMPQEHYNDSSKGSSTASGSPQSPLHLATGSRGGTSPTEGDSMEDDDDEKSESYSWKSHIHRHGKVGV* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2835 416 PANTHER TRANSCRIPTION FACTOR HHO6 8 409 - -
Mtr4g2835 416 Gene3D - 270 332 - -
Mtr4g2835 416 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 271 330 IPR017930 -
Mtr4g2835 416 MobiDBLite consensus disorder prediction 104 123 - -
Mtr4g2835 416 MobiDBLite consensus disorder prediction 232 279 - -
Mtr4g2835 416 MobiDBLite consensus disorder prediction 147 168 - -
Mtr4g2835 416 MobiDBLite consensus disorder prediction 124 146 - -
Mtr4g2835 416 MobiDBLite consensus disorder prediction 354 416 - -
Mtr4g2835 416 Pfam Myb-like DNA-binding domain 276 326 IPR001005 -
Mtr4g2835 416 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 274 328 IPR006447 GO:0003677
Mtr4g2835 416 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 409 IPR044787 GO:0003700|GO:0006355
Mtr4g2835 416 MobiDBLite consensus disorder prediction 104 168 - -
Mtr4g2835 416 MobiDBLite consensus disorder prediction 355 386 - -
Mtr4g2835 416 MobiDBLite consensus disorder prediction 237 276 - -
Mtr4g2835 416 Coils Coil 42 62 - -
Mtr4g2835 416 SUPERFAMILY Homeodomain-like 271 331 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2835 Mtr-Chr4 42012204 42015426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2835 7 364 G2-like Transcription Factor Family AT2G03500 40.054 3.13e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr4g2835 Myb_DNA-binding 2.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2835 - - mtr:MTR_4g086835 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2835 4 42012204 42015426 Mtr4g2835 4 42012204 42015426 ECH