Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2827 ATGGGGGGTTGCACTTCAAAGCCACAGAAACCAAACCCATATGCCCTTAGAGAAACGGAAACTGACCCAACACAAATCCCACAGACCCCACAAAGTCCCTACACCGGTAACCGGAAAGATGACGTCATCGCCGGAAAAAAGTCTCCGTTTTTTCCATTTTACAGTCCAAGTCCAGCTCGGTTTCTGAAGAAGTCTCCGTCGACTCCGGCGAGTGAAAGAAGCCGGAACTCGACGCCGAGAAGGTTTTTCCGGCGACCCTTTCCACCGCCGTCTCCGGCAAAACATATAAGGGCTGTGTTGGCTAGGAGACAAGGGAAGAAGGAAGCCGCGGCGATACCGGAAGAGGGGGAGGAGGGTGCTGGGGATTTGGACAAGAGATTTGGGTTTTCAAAGGATTTTGCTAGTAAGTTGGAGGTTGGGGAAGAAGTGGGTAGGGGGCATTTTGGGTATACTTCTGCTGCTAAATTCAAAAAGGGTGAGTTTAAGGGTCAACAAGTGGCTGTCAAAGTGATTCCTAAAGCAAAGATGACAACAGCAATTGCAATTGAAGATGTGAGAAGAGAGGTCAAAATATTGCGAGCTTTGAACGGGCACAGCAATTTGGTAAAATTTTATGATGCATTTGAAGACCAAGAAAATGTCTACATTGTAATGGAGTTATGTGAAGGGGGAGAGCTATTAGACATGATACTATCAAGAGGAGGGAAATACTCAGAAGATGATGCCAAAGCTGTCATGGTACAGATACTAAATGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACAGAGATCTTAAGCCTGAGAATTTTTTGTACACTACAAAGGATGAAAGTTCTGAGTTAAAAGCTATAGACTTTGGGTTGTCAGATTTTGTCAGACCAGATGAAAGGCTTAATGATATTGTTGGAAGTGCATATTATGTGGCTCCTGAAGTTCTCCATAGATCTTACAGTACAGAAGCTGATGTGTGGAGTATAGGTGTGATAGCATATATTCTATTATGTGGTAGTCGCCCATTTTGGGCTCGAACAGAATCAGGTATTTTTAGGGCAGTTTTGAAAGCTGATCCGGGATTTGACGAAGGTCCCTGGCCATCCTTATCTTCAGAAGCCAAAGATTTTGTCAAACGCCTACTCAATAAGGACCCTCGGAAGCGAATATCTGCTGCTCAGGCTCTGAGTCATCCTTGGATACGTAATTACAATGATGTAAAAGTTCCGCTTGATATTTTAATATTCAAGCTCATGAAGACATATATGAGATCGTCATCCTTGCGTAAGGCTGCCTTAAGGGCCTTATCTAAGACTTTAACTGCCGATGAACTCTATTATCTGAGAGAACAATTTGCGTTGTTGGAACCAAGCAAAAACGGCAGCATATCCTTGGAGAACATTAACAAGGCCTTGAAGAAACATGCAACAGATGCCATGAAAGAGTCTCGTATCACTGATTTTCTTTCCTCGCTGAGTTCATTACAATATAGAAGGATGGATTTTGAAGAATTTTGTGCGGCTGCATTAAGTGTGCATCAACTCGAAGCTCTTGATCGTTGGGAACAACATGCTCGCTGTGCATATGAACTTTTTGAGAAAGATGGAAATAGGGCTATTGTCATTGAAGAACTAGCTTCAGAACTTGGACTTGGTCCATCGATCCCTGTTCATGTTGTCCTTCATGACTGGATACGCCACACAGATGGGAAGTTAAGCTTTCTCGGGTTTGTCAAATTATTGCATGGTGTATCTAGCCGAAGCCTTCCAAAGGTTCAGTTATGA 1779 0.4351 MGGCTSKPQKPNPYALRETETDPTQIPQTPQSPYTGNRKDDVIAGKKSPFFPFYSPSPARFLKKSPSTPASERSRNSTPRRFFRRPFPPPSPAKHIRAVLARRQGKKEAAAIPEEGEEGAGDLDKRFGFSKDFASKLEVGEEVGRGHFGYTSAAKFKKGEFKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHSNLVKFYDAFEDQENVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYTTKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPGFDEGPWPSLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIRNYNDVKVPLDILIFKLMKTYMRSSSLRKAALRALSKTLTADELYYLREQFALLEPSKNGSISLENINKALKKHATDAMKESRITDFLSSLSSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRSLPKVQL* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2827 592 SUPERFAMILY EF-hand 430 580 IPR011992 -
Mtr4g2827 592 ProSiteProfiles Protein kinase domain profile. 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2827 592 Gene3D Transferase(Phosphotransferase) domain 1 226 411 - -
Mtr4g2827 592 CDD STKc_CAMK 138 398 - -
Mtr4g2827 592 Gene3D - 417 578 - -
Mtr4g2827 592 MobiDBLite consensus disorder prediction 18 36 - -
Mtr4g2827 592 Pfam Protein kinase domain 138 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2827 592 PANTHER CDPK-RELATED KINASE 2 36 585 - -
Mtr4g2827 592 MobiDBLite consensus disorder prediction 1 121 - -
Mtr4g2827 592 PANTHER SERINE/THREONINE-PROTEIN KINASE 36 585 - -
Mtr4g2827 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Mtr4g2827 592 MobiDBLite consensus disorder prediction 61 76 - -
Mtr4g2827 592 ProSitePatterns Protein kinases ATP-binding region signature. 143 169 IPR017441 GO:0005524
Mtr4g2827 592 Gene3D Phosphorylase Kinase; domain 1 139 225 - -
Mtr4g2827 592 MobiDBLite consensus disorder prediction 102 121 - -
Mtr4g2827 592 SMART serkin_6 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2827 592 Gene3D - 439 508 - -
Mtr4g2827 592 SUPERFAMILY Protein kinase-like (PK-like) 135 436 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2827 Mtr-Chr4 41926336 41932068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2827 1 587 EF-hand Containing Proteins AT3G50530 73.259 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr4g2827 Pkinase 4.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2827 K00924 - gmx:100798913 1037.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2827 4 41926336 41932068 Mtr4g2827 4 41926336 41932068 ECH