Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2801 ATGAACTACTACTCCCCCGCCGCTCTCACCTCCGATCAAGAACTCTCCGCCATCGTTGCTGCTTTAACCAACGTAGTCTCCGGCTCCACCTCCACCGCGTATTCCATACCTGAATTTTCCCCCACGGATTCCACTGTCGGAAGCAGCAGCAGCAGCTTAGAACGAATAGTGCCGGCAGTGAACATAGTTTCTTGCCGGGAATGCAACATAGCAGGATGTTTAGGATGCAATTTCTTCCCTGAAGAGAAAAAACAAAAACAAAAACAAAAAAGAGCTAAGAAGAAGTACAGAGGAGTGAGGCAGAGGCCATGGGGAAAATGGGCTGCTGAGATTCGTGACCCTAGACGTGCGGTCCGTGTTTGGCTTGGAACCTTTACCACGGCGGAGGAAGCTGCCAGAGCTTACGACAATGCTGCTATTGAGTTCCGTGGGCCAAGGGCCAAGCTCAATTTTCCAGTCGTTGATGAATCGCTTAAGAACGTGGTGGATCCAGAAGTGGTTGTCCCTTTGGAGGATATAAAGGACGAGAATATGAATCAAGAAATACAAATTGAGACAACTATGGGATTTGAGAGTAATAAGAATTGTGATTTTTGGGATAGTATCGGAGAAGCTGATTTTCAACAACTAATGAGGTTTATGGATTTTGATAGAGATTCTTCTGACTCAAGAACATGGAACACTTTTAGTTCTTGA 696 0.4583 MNYYSPAALTSDQELSAIVAALTNVVSGSTSTAYSIPEFSPTDSTVGSSSSSLERIVPAVNIVSCRECNIAGCLGCNFFPEEKKQKQKQKRAKKKYRGVRQRPWGKWAAEIRDPRRAVRVWLGTFTTAEEAARAYDNAAIEFRGPRAKLNFPVVDESLKNVVDPEVVVPLEDIKDENMNQEIQIETTMGFESNKNCDFWDSIGEADFQQLMRFMDFDRDSSDSRTWNTFSS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2801 231 ProSiteProfiles AP2/ERF domain profile. 95 152 IPR001471 GO:0003700|GO:0006355
Mtr4g2801 231 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 3 226 - -
Mtr4g2801 231 Pfam AP2 domain 95 144 IPR001471 GO:0003700|GO:0006355
Mtr4g2801 231 SUPERFAMILY DNA-binding domain 95 153 IPR016177 GO:0003677
Mtr4g2801 231 CDD AP2 96 154 IPR001471 GO:0003700|GO:0006355
Mtr4g2801 231 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 226 - -
Mtr4g2801 231 SMART rav1_2 95 158 IPR001471 GO:0003700|GO:0006355
Mtr4g2801 231 Gene3D AP2/ERF domain 94 154 IPR036955 GO:0003700|GO:0006355
Mtr4g2801 231 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Mtr4g2801 231 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2801 Mtr-Chr4 41694469 41695606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2801 4 155 AP2-EREBP Transcription Factor Family AT4G34410 49.189 3.26e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr4g2801 AP2 1.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2801 - - gsj:114420690 257.684