Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2799 ATGTCACCCCCTAAACCGTATATAAACCAACTCAAATCTCTGACTTTCCCTTCAACTTCAAAATCTTCTAAACCTTCAAAAACTCAGTTTCCATACATGAACTACGCCTTCTCCACTACCACCCTCACCTCCGATCAAGAACTCTCAGTCATCGTCGCTGCCCTAACCAACGTAGTCTCCGGTTCCACCTCCACCGTCGGCTTAGATCGAATAGTTCAACCGGTGAACATAGAAACCTGTCGGGAATGCAACATAGCAGGATGTTTAGGATGCAATTTCTTCCCTGAAGAGAAAAAACAAAAACAAAAACAAAAACAAAAGAGAGCTAAGAATAATAAGTACAGAGGAGTGAGGCAGAGACCATGGGGAAAATGGGCTGCTGAGATTCGTGACCCGAGACGTGCGGTTCGTGTTTGGCTTGGAACCTTTACCACGGCGGAGGAAGCTGCTAGAGCTTACGACAATGCCGCTATCGAGTTCCGCGGGCCGAGAGCCAAGCTTAATTTTCCACTTGTTGATGAATCTCTTAAGCGTACTGTTGAGGATCCAGAATTGGTTGTTCATGTAAAGGATGAAGAAATGCAAATTGAGACAACGATGGGATTTGGGAATAATACGACTGAATGTGATTTTTGGGATAGTATTGGGGAAGAAGCTGATTTTCAACAACTTATGAGGTTTATGGATTCTTCTCATTCTAGAACAGGAAACACTTTTAATTAG 723 0.4343 MSPPKPYINQLKSLTFPSTSKSSKPSKTQFPYMNYAFSTTTLTSDQELSVIVAALTNVVSGSTSTVGLDRIVQPVNIETCRECNIAGCLGCNFFPEEKKQKQKQKQKRAKNNKYRGVRQRPWGKWAAEIRDPRRAVRVWLGTFTTAEEAARAYDNAAIEFRGPRAKLNFPLVDESLKRTVEDPELVVHVKDEEMQIETTMGFGNNTTECDFWDSIGEEADFQQLMRFMDSSHSRTGNTFN* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2799 240 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 33 230 - -
Mtr4g2799 240 SUPERFAMILY DNA-binding domain 113 171 IPR016177 GO:0003677
Mtr4g2799 240 Pfam AP2 domain 113 162 IPR001471 GO:0003700|GO:0006355
Mtr4g2799 240 Gene3D AP2/ERF domain 112 172 IPR036955 GO:0003700|GO:0006355
Mtr4g2799 240 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 230 - -
Mtr4g2799 240 PRINTS Ethylene responsive element binding protein signature 114 125 IPR001471 GO:0003700|GO:0006355
Mtr4g2799 240 PRINTS Ethylene responsive element binding protein signature 136 152 IPR001471 GO:0003700|GO:0006355
Mtr4g2799 240 SMART rav1_2 113 176 IPR001471 GO:0003700|GO:0006355
Mtr4g2799 240 CDD AP2 113 170 IPR001471 GO:0003700|GO:0006355
Mtr4g2799 240 ProSiteProfiles AP2/ERF domain profile. 113 170 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2799 Mtr-Chr4 41679794 41680738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2799 42 173 AP2-EREBP Transcription Factor Family AT4G34410 49.432 3.40e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr4g2799 AP2 1.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2799 - - ccaj:109799734 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2799 4 41679794 41680738 Mtr4g2799 4 41679794 41680738 ECH