Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2798 ATGAACAACTCCTCTTCCTCCTTCTCCTCCTCCACTCTCCCCTCCGATCAAGAACAATCCGTCATTGTCACCGCCCTAACCAAAGTCGTCTCCGGCTCCACCTCAACCGCAAACTCATTACCGGAATTTCATCTCCCGGATTCCACCATCGGAAGCAGCAGCAGCATGGAGCGAATTCCACCAACGAACATGGAAACCTGCCGCGAATGCAACATAGCAGGATGTTTAGGATGCAATTTCTTCTCTCAAGAGAACAAGAAAAAACAAATAAGAGCTAAAAAGAAGTATAGAGGAGTGAGACAGAGACCATGGGGAAAATGGGCTGCTGAGATTCGTGACCCGAGACGTGCTGTTCGTGTTTGGCTCGGAACCTTTACCACGGCGGAGGAAGCTGCCAGAGCTTATGACAATGCCGCCATCGAGTTTCGTGGGCCGAGGGCAAAGCTCAATTTTCCACTTGTTGATGAATCCCTTAAGCATGTTGAGGAACCAGAAGTGATCGTTCATTCTAAGCATGTAACAAAGGATGAGAATATGAATCAAGAAATGCAAATTGAAACAATGACGGGGTTTGAGAATAATAAGGATTGTGATTTTTTGGATAGCATTGGTGAACCTGATTTTCAACAATTTATGAAGTTTATGGAATTTTCTGGAGATTCTTCTGGTTCTAGGACAGGGAATCCTTTTAATTAG 696 0.4497 MNNSSSSFSSSTLPSDQEQSVIVTALTKVVSGSTSTANSLPEFHLPDSTIGSSSSMERIPPTNMETCRECNIAGCLGCNFFSQENKKKQIRAKKKYRGVRQRPWGKWAAEIRDPRRAVRVWLGTFTTAEEAARAYDNAAIEFRGPRAKLNFPLVDESLKHVEEPEVIVHSKHVTKDENMNQEMQIETMTGFENNKDCDFLDSIGEPDFQQFMKFMEFSGDSSGSRTGNPFN* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2798 231 Gene3D AP2/ERF domain 94 154 IPR036955 GO:0003700|GO:0006355
Mtr4g2798 231 ProSiteProfiles AP2/ERF domain profile. 95 152 IPR001471 GO:0003700|GO:0006355
Mtr4g2798 231 Pfam AP2 domain 95 144 IPR001471 GO:0003700|GO:0006355
Mtr4g2798 231 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 7 224 - -
Mtr4g2798 231 MobiDBLite consensus disorder prediction 35 57 - -
Mtr4g2798 231 CDD AP2 96 152 IPR001471 GO:0003700|GO:0006355
Mtr4g2798 231 SUPERFAMILY DNA-binding domain 95 153 IPR016177 GO:0003677
Mtr4g2798 231 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Mtr4g2798 231 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
Mtr4g2798 231 SMART rav1_2 95 158 IPR001471 GO:0003700|GO:0006355
Mtr4g2798 231 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 7 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2798 Mtr-Chr4 41677773 41678895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2798 8 155 AP2-EREBP Transcription Factor Family AT4G34410 46.995 2.95e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mtr4g2798 AP2 1.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2798 - - gmx:100820426 268.085