Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2789 ATGAACTTCGCTTGGGATGCAATGAGTGTGAAGACACCTGGAAGTGTTAACCTAGCAAGCCAGTCTTCAATATACTCCCTCACTTTTGATGAGTTACAAAGCACCATTGGAGGAGTTGGAAAAGATTTTGGATCAATGAACATGGATGAACTCTTGAAAAACATATGGAATGTTGAAGAGACTCAAGCCTTGACATCTCTAACTGGTGGAGGAGTAGGAGAAGGACCTAACAACCCAAATGGTGGTACTTTGCAAAAACAAGGCTCATTGACATTGCCAAGGACACTTAGTCAGAGAAAAGTTGATGAAGTTTGGAGGGATTTGATGAAAGATAGTGGTTCATCTATGCCTCAAAGACAACCAACATTAGGTGAAGTGACTTTGGAGGAGTTTTTGGTGAGAGCTGGTGTTGTGAAAGAAGATACGCCTAATCATGCTCAACAAATCGAAAGACCGAATAATAATGAATGGTTTAGTGACTTTTCTAGGTCAAACAATAACACCAATCTACTTGGCTTTCAACAACCAAATGGAAATAATGGGGATATGAGCGACAACAATAACTTAGTTCCGAAACACGTTCCTCTTCCTCCTTCCTCAATTAACTTGAATCACTCTCAACGGCCGCCACCACTTTTCCCGAAACCTACAACTGTAGCATTTGCTTCTCCTATGCATTTGCTAAACAATGCTCAACTTGGTAACAATGGCAGAAGTGTAGGTCCTGGTGTTGGAACGCTTGGTTTATCTGCCTCGAATATCACAGCTCCTGTTGCTTCTCCGGGAAGTAAAATGTCGCCGGATTTGATTACAAAGCGTAATTTAGATCCTTCTTTACTGTCACCAGTTCCTTATGCAATCAACAGAGGGAGGAAGTGTGTTCCTGTAGAAAAAGGTGTTGAAAGGAGACAGAAGAGAATGATAAAGAATAGAGAATCAGCTGCGAGGTCACGGGCTCGCAAGCAGGCCTACACTGTTGAACTGGAGGCTGAAGTTGCAAAACTTAAGGAAGTAAACGAGGAATTACAAAGGAAACAGGCAGAGTTTATGGAAATGCAGAAAAGTAAGGAGGACCTGGTGCGGACAAATAAAATAAAATACTTGAGAAGGACACTTACAGGTCCATGGTAG 1131 0.4191 MNFAWDAMSVKTPGSVNLASQSSIYSLTFDELQSTIGGVGKDFGSMNMDELLKNIWNVEETQALTSLTGGGVGEGPNNPNGGTLQKQGSLTLPRTLSQRKVDEVWRDLMKDSGSSMPQRQPTLGEVTLEEFLVRAGVVKEDTPNHAQQIERPNNNEWFSDFSRSNNNTNLLGFQQPNGNNGDMSDNNNLVPKHVPLPPSSINLNHSQRPPPLFPKPTTVAFASPMHLLNNAQLGNNGRSVGPGVGTLGLSASNITAPVASPGSKMSPDLITKRNLDPSLLSPVPYAINRGRKCVPVEKGVERRQKRMIKNRESAARSRARKQAYTVELEAEVAKLKEVNEELQRKQAEFMEMQKSKEDLVRTNKIKYLRRTLTGPW* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2789 376 Coils Coil 321 362 - -
Mtr4g2789 376 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 300 345 IPR004827 GO:0003700|GO:0006355
Mtr4g2789 376 MobiDBLite consensus disorder prediction 69 88 - -
Mtr4g2789 376 MobiDBLite consensus disorder prediction 168 187 - -
Mtr4g2789 376 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 14 376 - -
Mtr4g2789 376 SUPERFAMILY Leucine zipper domain 302 351 IPR046347 GO:0003700|GO:0006355
Mtr4g2789 376 Gene3D - 300 358 - -
Mtr4g2789 376 Pfam bZIP transcription factor 302 357 IPR004827 GO:0003700|GO:0006355
Mtr4g2789 376 MobiDBLite consensus disorder prediction 168 188 - -
Mtr4g2789 376 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 14 376 IPR043452 GO:0003700|GO:0045893
Mtr4g2789 376 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 305 320 IPR004827 GO:0003700|GO:0006355
Mtr4g2789 376 SMART brlzneu 298 362 IPR004827 GO:0003700|GO:0006355
Mtr4g2789 376 CDD bZIP_plant_BZIP46 302 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2789 Mtr-Chr4 41556748 41560389 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2789 18 376 bZIP Transcription Factor Family AT1G49720 46.410 1.06e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr4g2789 bZIP_1 2.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2789 K14432 - gmx:100776600 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2789 4 41556748 41560389 Mtr4g2789 4 41556748 41560389 ECH