Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2783 ATGTTCCTCTACAAACTTCTCTTTTTGTTGGGTTTCTTACATTTTCTTGGAATGCACCTCCCTCTTCTAATGGCTGATTGCCCTTTGAATTTTGCTGCTTCAAACTTTACACTGGCATCCTCTTTATGCTCTGACCAAGGTGAGCGAGGAAAATGTTGCCGCTACATTAATGCTAATATTGCAATTTCTGTTGCTCATTTTGCTAATGCAACAAGCAACCTAGGGGTCCCTCTAAATACCTCTGATATCTGCCTCCAAACCATATCTCAGAACTTGCAACTTTATGGAGTTCCACGGCTTGCAACAGTCTTCTGTGGATTCGGGACAAAAATTCGCGTTAATTATGAATGCAAGGGTCGAACTAGTGTTATGCAGATGCTGCAATCTCCCAGATTTGTGGAGGTCACAAAACATTGCAGATTGCCTCTTGCAAAGGAAAGTAAATGTAAGAAGTGTGTAAACGCGAGCATTGGTTATCTGCGCCAATTAGGAATTGAAGATAATATTACACTGAGTACATGTCGTGATGCTACTTTTGCTGCACTAGCAAGCCAAGTAGATGAGATGTATACCACTGATATTGCAAGTTGTTTCTTTGGCGTTCAAGGACTTCTCAGGACTCCTGTTTCAGAATCATCCCCATCATTACCTGCTCCTGAGGTTTCGCCAAGTCCACCAGTTGCTGCTGATAGCCCAAGTCAACTATTGTTAGGTCTACCAACTAAGGGAAAACACCATTCATATCACTTGGCATTAGTTCCATGTATTGCTATTGCAGTTACAGCTGTTGCTTTTGTGATGTTCATAGTCTTGATGATTCTAATTCGCCAAAAAAGCAGAGAGCTAAATGAGCCTCATAATTTTGGTAAACCCAGTTCGAAAACTGTTCCTTCTATGGCAAAATGGAAATTTCAGGAAGGCTCGTCATCTATGTTTCGAAAGTTCAACTTTAAAGAGATAAAGAAGGCAACAGAGGGGTTTAGCACCATTATTGGCCAAGGGGGATTTGGAACGGTATATAAAGCTCATTTTAGTGATGGCCAAGTTGCAGCAGTAAAGCGAATGGACAGAGTCTCAGAACAGGGAGAGGATGACTTCTGCAGAGAAATTGAGCTTCTTGCTCGGCTGCACCACCGGCATCTTGTTACGTTAAGAGGTTTTTGCATCAAAAAACAAGAGAGGTTTCTGCTGTACGAGTACATGGGAAATGGAAGCTTAAAAGATCATCTTCATTCCCCTGGTAAAACACCACTAAGTTGGCGAACTAGAATCCAAATTGCCATTGATGTGGCTAATGCACTGGAGTACCTTCATTTCTATTGTGATCCTCCACTGTTTCACAGAGATATCAAGGCTAGCAACACTTTACTGGATGAGAACTTTGTTGCTAAGATAGCTGATTTTGGCCTTGCACAAGCTTCAAAAGATGGTTCGATATGCTTTGAACCTGTAAACACTGAAATATGGGGAACTCCAGGTTATATGGATCCGGAATATATTGTTACTCAAGAGCTCACCGAGAAAAGTGATATATACAGTTATGGGGTGTTACTACTGGAAATTGTGACAGGAAGAAGAGCTATTCAAGATAATAAGAATTTGGTGGAATGGGCCAAACCATACATGGAATCAGAAACTAGATTATTAGAACTAGTAGATCCCAATGTGAGGGAATCTTTTGACTTGGATCAGCTTCAAACAGTAATTTCTATAGTAGGATGGTGCACACAGAGAGAAGGAAGAGCAAGACCTTCAATAAAACAAGTCCTTAGGCTTCTGTATGAGACATCAGAACCAATGCACACTGAGTTTCTACAAGCTGTTGAAGACGAGGAGAGTCAAGGAAATGAGCAGAGAGGCAGAAGAAGCAAAGGAAAAATGCTCAGAAATGAAGGAAATTTTCACAGTGGGGATGGAAGATATCTTGCTTCGTCTTCAAGTACATCTCGGTCGTATTGTAGTAGAAGTTTTTTACTAGAAAATGGGTCTGCACAGTCATCACCAAATGTATTTTCAGTCTGA 2022 0.41 MFLYKLLFLLGFLHFLGMHLPLLMADCPLNFAASNFTLASSLCSDQGERGKCCRYINANIAISVAHFANATSNLGVPLNTSDICLQTISQNLQLYGVPRLATVFCGFGTKIRVNYECKGRTSVMQMLQSPRFVEVTKHCRLPLAKESKCKKCVNASIGYLRQLGIEDNITLSTCRDATFAALASQVDEMYTTDIASCFFGVQGLLRTPVSESSPSLPAPEVSPSPPVAADSPSQLLLGLPTKGKHHSYHLALVPCIAIAVTAVAFVMFIVLMILIRQKSRELNEPHNFGKPSSKTVPSMAKWKFQEGSSSMFRKFNFKEIKKATEGFSTIIGQGGFGTVYKAHFSDGQVAAVKRMDRVSEQGEDDFCREIELLARLHHRHLVTLRGFCIKKQERFLLYEYMGNGSLKDHLHSPGKTPLSWRTRIQIAIDVANALEYLHFYCDPPLFHRDIKASNTLLDENFVAKIADFGLAQASKDGSICFEPVNTEIWGTPGYMDPEYIVTQELTEKSDIYSYGVLLLEIVTGRRAIQDNKNLVEWAKPYMESETRLLELVDPNVRESFDLDQLQTVISIVGWCTQREGRARPSIKQVLRLLYETSEPMHTEFLQAVEDEESQGNEQRGRRSKGKMLRNEGNFHSGDGRYLASSSSTSRSYCSRSFLLENGSAQSSPNVFSV* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2783 673 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Mtr4g2783 673 PANTHER BNAC06G02630D PROTEIN 5 673 - -
Mtr4g2783 673 MobiDBLite consensus disorder prediction 607 647 - -
Mtr4g2783 673 SUPERFAMILY Protein kinase-like (PK-like) 305 596 IPR011009 -
Mtr4g2783 673 Pfam SPARK 25 163 IPR043891 -
Mtr4g2783 673 Pfam Protein kinase domain 329 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2783 673 ProSiteProfiles Protein kinase domain profile. 325 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2783 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Mtr4g2783 673 Gene3D Transferase(Phosphotransferase) domain 1 401 620 - -
Mtr4g2783 673 MobiDBLite consensus disorder prediction 607 633 - -
Mtr4g2783 673 CDD STKc_IRAK 331 593 - -
Mtr4g2783 673 SMART serkin_6 325 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2783 673 PANTHER OS01G0750732 PROTEIN 5 673 - -
Mtr4g2783 673 Gene3D Phosphorylase Kinase; domain 1 292 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2783 Mtr-Chr4 41518911 41524420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2783 19 672 Receptor kinase-like Gene Family AT3G19300 59.119 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Mtr4g2783 Pkinase 5.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2783 - - gmx:100809641 1078.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2783 4 41518911 41524420 Mtr4g2783 4 41518911 41524420 ECH