Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2752 ATGGATGATTATAGAGAAGGCTCATTATCATCATCTTACTACAGCATTCTCGGTGTTAGCTCAGATTCTTCTATAGATGAAATAAGGCGTGCTTATAGGAAGCTTGCTATGCAATGGCATCCAGATAGGTGGACAAGAACACCTTCTTTACTTAGCGAAGCCAAGTGTAAATTTCAGAACATTCAAGAAGCTTATTCAGTGCTATCTGATCCCAAGAAAAGAAGTATGTACGATGCTGGCTTGTATGATCCTCAAGAGGAAGAAGTTGAGGATTTTTCTGATTTTGTGGACGAAATGGTGTCCCTTATGGCTGAAGTTAGGCGAGAGGAGAAGGTTTATGGTTTGGAGGAGTTGCAGGACATGTTCATGGAAATGGCTGAAGGATTCCAGAGTCCTTCAGTGTATTGTGGGACACCATCGGTGGTTGATGAATCCTTTGCTAACAGAGGAAGTGTTTTGACACGATAA 468 0.4167 MDDYREGSLSSSYYSILGVSSDSSIDEIRRAYRKLAMQWHPDRWTRTPSLLSEAKCKFQNIQEAYSVLSDPKKRSMYDAGLYDPQEEEVEDFSDFVDEMVSLMAEVRREEKVYGLEELQDMFMEMAEGFQSPSVYCGTPSVVDESFANRGSVLTR* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2752 155 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Mtr4g2752 155 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 147 - -
Mtr4g2752 155 Gene3D DnaJ domain 9 132 IPR036869 -
Mtr4g2752 155 SUPERFAMILY Chaperone J-domain 12 84 IPR036869 -
Mtr4g2752 155 SMART dnaj_3 11 73 IPR001623 -
Mtr4g2752 155 PRINTS DnaJ domain signature 14 32 IPR001623 -
Mtr4g2752 155 PRINTS DnaJ domain signature 32 47 IPR001623 -
Mtr4g2752 155 PRINTS DnaJ domain signature 53 73 IPR001623 -
Mtr4g2752 155 CDD DnaJ 18 70 IPR001623 -
Mtr4g2752 155 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Mtr4g2752 155 Pfam DnaJ domain 13 78 IPR001623 -
Mtr4g2752 155 PANTHER PUTATIVE, EXPRESSED-RELATED 8 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2752 Mtr-Chr4 41210906 41212433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2752 13 79 C2H2 Transcription Factor Family AT1G74250 50.000 1.95e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2752 - - lja:Lj0g3v0084989.1 208.379