Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2738 ATGGATGATGAAGTTGTTCAGCGTGTTTTCCATGAAGGTGGACGCGATTACTTTCAGCAACAACCTTCAACTTCTTCTTCGTCGATTCTTCAATCTCTTCCTCTTCATGTGTCTTTTGATCATGGATATTATTTATTGGTGAAATCTATCCAAGAACTCCGAGAGAAAAAAGATGGCCTTGTTACAGTTGGCATTGGTGGTCCGAGCGGTTCTGGTAAAACAAGCTTAACAGAAAAGGTGGCATCTGTTTTTGGTTGTACTGTTATATCAATGGAGAATTATTGTGATGGAGTTGATGAAGGGAACGTTCTGGATTCTATAGATTTTGGCACCTTGATCAAGAATCTTGAGGATTTGACAAAAGGCGATGATACTTTAATTCCAGAGTTTGATTATCAGCAAAAGAGACGTGTTGGCTATAAAAAAATTACGAGTGCTTCATCTGGGGTGGTAATAGTTGATGGTACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGATATTCGCGTTGCAGTGGTTGGTGGCGTTCATTTTAGCCTACTTTCTAAAGTTCGCTATGACATCGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCATTATTTAGGAAGCACATTGAGTCAGATCTTCATCATGCACAGATCAGAATTAACAACAGCTTTGTGTCATCATTTAGAGAGGCAATCTACAAGGTTAAATGCAGAAGCAAGTCTTCAGATGGACATCCAGGTTCTTCTTTTCAAGGAAATCAAGCTCAAACAGATAATTTTATCGAAATGTACCTTAGACCACCTTCGGCTAGTGAAGAAGCAGGGGTAAATGACTGGATCAAAGTGCGGCAGTCTGGAATTAGGTATTATTTATCCCTTGGTGACCAAAGGATTGTTGACAAAAATTTCATTATCAGGCCGAAAGCTGAGTTTGAGGTTGGACGAATGACATTGGGTGGGTTGCTGGCTCTTGGGTACATTGTTGTGGTTAGTTATAAACGTGCATCCACAACTGTCAATTATGGCAAGGTCTCAATGTCGTTTGAAACCATTGATGTTCTTGGTGAGACATTCATGGTCATGAGAGGAACTGATAGGAAGACTGTTGGAAAAGAAGCATTGAGGATGGGTATTGATGGACCTTGGATTACTAAATCATATCTTGAAATGATTCTTGAGAGAAAAGGTGTACCCCGTCTTAGTACACCGCCACTTGTGCCTAATAGAGCTGTGGCTGGCAGTCAAGAAACAGCAGTCGTTGCACCAAAGCCAATTCGTGTCACCCCTAACCTTGTTACTGGGCTTGAGGATTTATCTCAGCCATGGACCCGATCCCCAACAAAATCAAAAATTGAACCTTTTGTGGCTACATGGCATTTCACATCTCCAGATTCCTCCCATATTGACAACACAGTCTTAGATCCCTCATCTTTCAGGGACACTATTAGGCTTGCTCCAATGCCTGATTCATATGACCTGGACAGGGGATTGCTTTTGGCAGTTCAGGCAATACAAGCTTTGTTGGAGAATAAAGGTGTTCCGGTCATTGTTGGAATTGGCGGTCCAAGTGGGTGTGGGAAGACAAGTTTGGCTCATAAAATGGCAAATATCATTGGTTGTGAAATAGTTTCCCTAGAAAGTTATTACAAACAAGGAAAGGATTTTAAATATGATGATTTCAACTCACTTGATTTATCTTTGCTATCAAAGAATATTGATGACATAAGAAATGGCCGAAGAACAAAAGTACCTATATTTGACTTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGCGTCTATGCTTTGCATCCTGATATCCGAATGTCCCTTGACTTGTGGATTGCTGTTGTAGGAGGTGTTCACTCACATTTGATTTCACGAGTTCAAAGGGATAAGAGTAGAGTGGGATGTTTTATTTCCCAAAATGAGATCATGATGACAGTGTTTCCTATGTTCCAGCAGCTTATTGAACCGCATCTTGTTCATGCACATCTTAAAATTCGAAATGACTTTGACCCTGTGCTTTCTGCTGAGAGTTCATTGTTTGTGTTGAAGAGTAACAAAAAAGTAGCTTATCAAGATATTCTAGCAATTCTTGATCCAGCAAAATTTTGCAGTTCAGTGCAGAAATTCATAGACATTTACATGAGGCTTCCTGGGATCCCTTCTAATGGTCAATTAACAGATAGTGATTGTATTCGGGTCAGAATATGTGAAGGCAGATTTGCATTACTGATACGTGAGCCTATCAGAGAAGGAAACTTCATCATTCAGCCTAAAGTGGATTTTGATATTAGCATTACTACGGTTGCTGGTCTTCTGAACCTTGGGTATCAAGCAGTTGCTTACATTGAAGCGTCTGCATTCATCTATCAGGATGGAAAGATTCTAATTGAGGTTGACCATCTACAAGATGTCCCTGGTCCATACATTCAGATAAAGGGTGTTTCTAAAGATGCTGTGGCAGCAGCAGGTTCGATGCTTAAATTGGATGGTTCATATACTACTAAGAGTTACCTTGAAATAGTTTTGGAAAGACTACCAACAATAGAGAGAAGTTCTGGTGGGATTAATTTTCAGCAATCAACAAGGCTGCTAGAGATTGTTGATTTTATTCAATCTCAGGGATGCAGTTCTTCTTCAGAATCCTCATCAAGTAGGGTAGTCTCTCCGATTGAAGGCATTATTGAGGAGATGCAATCAAAGATTAGAAGGCTTGAAAGGTGGCTTGCTATAAATACGGTTCTGTGGACATTTCTAATGTCAGCTATTGTTGGCTATTCTCTTTATCAAAGGAGACGTCGATGA 2853 0.401 MDDEVVQRVFHEGGRDYFQQQPSTSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLTEKVASVFGCTVISMENYCDGVDEGNVLDSIDFGTLIKNLEDLTKGDDTLIPEFDYQQKRRVGYKKITSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIESDLHHAQIRINNSFVSSFREAIYKVKCRSKSSDGHPGSSFQGNQAQTDNFIEMYLRPPSASEEAGVNDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYIVVVSYKRASTTVNYGKVSMSFETIDVLGETFMVMRGTDRKTVGKEALRMGIDGPWITKSYLEMILERKGVPRLSTPPLVPNRAVAGSQETAVVAPKPIRVTPNLVTGLEDLSQPWTRSPTKSKIEPFVATWHFTSPDSSHIDNTVLDPSSFRDTIRLAPMPDSYDLDRGLLLAVQAIQALLENKGVPVIVGIGGPSGCGKTSLAHKMANIIGCEIVSLESYYKQGKDFKYDDFNSLDLSLLSKNIDDIRNGRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRMSLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSAESSLFVLKSNKKVAYQDILAILDPAKFCSSVQKFIDIYMRLPGIPSNGQLTDSDCIRVRICEGRFALLIREPIREGNFIIQPKVDFDISITTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVSKDAVAAAGSMLKLDGSYTTKSYLEIVLERLPTIERSSGGINFQQSTRLLEIVDFIQSQGCSSSSESSSSRVVSPIEGIIEEMQSKIRRLERWLAINTVLWTFLMSAIVGYSLYQRRRR* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2738 950 Gene3D - 703 862 - -
Mtr4g2738 950 PANTHER URIDINE KINASE 2 422 - -
Mtr4g2738 950 PANTHER URIDINE KINASE 602 941 - -
Mtr4g2738 950 PANTHER URIDINE KINASE 477 602 - -
Mtr4g2738 950 CDD UMPK_like 62 224 - -
Mtr4g2738 950 Gene3D - 514 702 IPR027417 -
Mtr4g2738 950 Gene3D - 61 241 IPR027417 -
Mtr4g2738 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 685 IPR027417 -
Mtr4g2738 950 CDD UMPK_like 517 685 - -
Mtr4g2738 950 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 2 422 - -
Mtr4g2738 950 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 477 602 - -
Mtr4g2738 950 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 602 941 - -
Mtr4g2738 950 SMART AAA_5 514 658 IPR003593 -
Mtr4g2738 950 SMART AAA_5 59 209 IPR003593 -
Mtr4g2738 950 PRINTS Uridine kinase signature 515 532 - -
Mtr4g2738 950 PRINTS Uridine kinase signature 542 553 - -
Mtr4g2738 950 PRINTS Uridine kinase signature 636 646 - -
Mtr4g2738 950 Pfam Phosphoribulokinase / Uridine kinase family 517 682 IPR006083 GO:0005524|GO:0016301
Mtr4g2738 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 172 IPR027417 -
Mtr4g2738 950 SUPERFAMILY CYTH-like phosphatases 723 857 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2738 Mtr-Chr4 40936292 40953227 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2738 510 713 PRT Gene Family AT1G55810 23.394 4.05e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2738 - - mtr:MTR_4g084660 1796.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2738 4 40936292 40953227 Mtr4g4013 4 53956250 53961602 PCT