Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2735 ATGGAAATGAGTAACAGCAGCAACATGATGTGGTTTTTCAAGCATAGAGGGTTTGATGATACCATCATACAAAAAATGTTCACAAAATGCAAGCGTCTCGAAACAGCGCATCGCGAACGAGCGGATGAAAATTGGGATTATTTGAAAACAATTGGCATTCAAGAAAGAAAACTTCCTTCAATTGTTTCAAAATGCCCCAAAATTCTTGTACTTGGTCTTAATGAAAAGATTGTTCCAATGGTTGAATGTCTCAACACACTTGCAACTAAGCCTCATGAAGTTGCATCTGCTATAGCTAAGTTCCCTCAAATACTCTCTTGTAGTGTGGAAGAGAAGCTTTGTCCTCTTTTGGCATTTTTTCAAACATTAGGCGTGCCCGAAAAACATATCGGGAAAATTTTATTGTTAAACCCTAGGCTTATTAGTTATAGCATTGAGACCAAGATGACGGAAATTGTGAAATTTCTTGCTAGTGTTGGTCTTGATAAAAACGGAATGATTGGAAAAATTATGGTTAAGGACCCGTATATTATGGGTTATAGTGTTGATAAAAGGCTTCGTCCTACTTCGGAGTTTTTGAAGTCGATAGGTTTGACTGAGCACGATCTTCAGGTATTAGCGTTGAACTTTCCGTCGATTTTGAGTAGAGATGTGGATAAGGTTTTGGTACACAATTATGATTTTTTAAAGAACTGTGGATTTCAAGGACGACAGATAGTTGATTTGGTGGTTGGTTATCCTCCTATTTTGATCAAGAGTGTTCGGAATTCTTTGGAACCGAGGATCAAGTTTTTGGTAGATGTAATGGGGAGAGAAGTTGATGAAATTATTGATTATCCATGCTTCTTTCGTCATGGCCTGAAGAAAAAATTAGTGTCGCGGCACAAACTCCTAAAGAAGAGGAATTTAAATTGCAGCTTGAGTGAAATGCTGGACTGTAATGAGAAGAAGTTTCACTTGAAGTTTGGCTTGTTAGAAGGACATGCCTTGAGTAACTAG 999 0.3774 MEMSNSSNMMWFFKHRGFDDTIIQKMFTKCKRLETAHRERADENWDYLKTIGIQERKLPSIVSKCPKILVLGLNEKIVPMVECLNTLATKPHEVASAIAKFPQILSCSVEEKLCPLLAFFQTLGVPEKHIGKILLLNPRLISYSIETKMTEIVKFLASVGLDKNGMIGKIMVKDPYIMGYSVDKRLRPTSEFLKSIGLTEHDLQVLALNFPSILSRDVDKVLVHNYDFLKNCGFQGRQIVDLVVGYPPILIKSVRNSLEPRIKFLVDVMGREVDEIIDYPCFFRHGLKKKLVSRHKLLKKRNLNCSLSEMLDCNEKKFHLKFGLLEGHALSN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2735 332 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 8 325 - -
Mtr4g2735 332 Gene3D Transcription termination factor 3, mitochondrial 89 326 IPR038538 -
Mtr4g2735 332 Pfam mTERF 106 318 IPR003690 GO:0003690|GO:0006355
Mtr4g2735 332 Pfam mTERF 8 120 IPR003690 GO:0003690|GO:0006355
Mtr4g2735 332 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Mtr4g2735 332 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Mtr4g2735 332 SMART mt_12 59 90 IPR003690 GO:0003690|GO:0006355
Mtr4g2735 332 SMART mt_12 240 272 IPR003690 GO:0003690|GO:0006355
Mtr4g2735 332 SMART mt_12 168 199 IPR003690 GO:0003690|GO:0006355
Mtr4g2735 332 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Mtr4g2735 332 SMART mt_12 204 235 IPR003690 GO:0003690|GO:0006355
Mtr4g2735 332 SMART mt_12 24 54 IPR003690 GO:0003690|GO:0006355
Mtr4g2735 332 PANTHER CGI-12 PROTEIN-RELATED 8 325 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2735 Mtr-Chr4 40917162 40918770 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr4g2735 mTERF 3e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2735 K15032 - gmx:100816929 526.168