Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2731 ATGTCTGATTCATTCTGTAGCTTTCTCTCTGCCACTTCAAATTCCAACCATAATTCCCATGCACCTTCAAAAATCACCTCAATAGTCCAACCTTATTGTATTTGCACCCATTGCAACCATCTCCTCCCCTTCAATCACCATCTCGCTGAGCAAGGAACAAGCAATATTATGCATCCTCAACCAAGCTCAAGGTGGAGTCCAACACCAGTTCAATTACTAGTCCTTGAAGAATTGTATAGGCAAGGCATGAAAACACCATCAGCTGAACAAATCCAACAAATTGCTTCGCAGCTTCGACAATTCGGGAAGATTGAAGGAAAAAATGTGTTCTATTGGTTCCAGAATCACAAGGCGAGAGAGCGACAGAAGCGTCGTCGCCTTGAGATGGAGGAAACAACTGAAGATAAAAAAGAGAAAGAGAAGTACGTTATGGGAAATTCAAAAAAGCAAGAAGGTGCAGAGACAGGTGGTGGAGTTAAAGAGACAAAGAAGTGGGCAACCACTTCAAACTGCAGTGAACAAGCAGAGGATATAGCAGAAAAGGGATCAATACAAGTTTTGAGGAAAAACATTGCAGAAAGACAAGGAAAATGCCAAAATATTGAAATTCCTTATTGCTTCAATCCTTTCACTATGCCAACTACAACTTCTTCAGCAGCATATAGAACTTGTAGTAATAATAATACACAACTTTTAACCCCTCAAAATTATGATTTATTACCATCCAACAAAGTAAATTTCAACTACTATGAAGAACAAAATGCAGATTATCCTAGGACACTTGATCTTTTTCCAGCTAAGGAGGATAAACAAGATGGAATTTCTGAGAGAAAATCTATGTTTTGTGTTAATGCTTCTATGATGGACACTCATGAAATCAACTCTTCCTCCAGCCAGTTTTTTGAGTTTCTTCCTTTAAGAAATTAA 927 0.383 MSDSFCSFLSATSNSNHNSHAPSKITSIVQPYCICTHCNHLLPFNHHLAEQGTSNIMHPQPSSRWSPTPVQLLVLEELYRQGMKTPSAEQIQQIASQLRQFGKIEGKNVFYWFQNHKARERQKRRRLEMEETTEDKKEKEKYVMGNSKKQEGAETGGGVKETKKWATTSNCSEQAEDIAEKGSIQVLRKNIAERQGKCQNIEIPYCFNPFTMPTTTSSAAYRTCSNNNTQLLTPQNYDLLPSNKVNFNYYEEQNADYPRTLDLFPAKEDKQDGISERKSMFCVNASMMDTHEINSSSSQFFEFLPLRN* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2731 308 SUPERFAMILY Homeodomain-like 57 126 IPR009057 -
Mtr4g2731 308 ProSiteProfiles 'Homeobox' domain profile. 58 123 IPR001356 GO:0003677
Mtr4g2731 308 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 17 308 - -
Mtr4g2731 308 MobiDBLite consensus disorder prediction 123 147 - -
Mtr4g2731 308 MobiDBLite consensus disorder prediction 121 165 - -
Mtr4g2731 308 Pfam Homeodomain 62 122 IPR001356 GO:0003677
Mtr4g2731 308 Gene3D - 62 128 - -
Mtr4g2731 308 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 17 308 IPR044555 GO:0003700|GO:0099402
Mtr4g2731 308 Coils Coil 119 139 - -
Mtr4g2731 308 CDD homeodomain 61 124 IPR001356 GO:0003677
Mtr4g2731 308 SMART HOX_1 60 127 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2731 Mtr-Chr4 40861782 40864650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2731 62 176 Wox Gene Family AT3G18010 56.522 1.96e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mtr4g2731 Homeodomain 3.6e-19 CL0123