Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2701 ATGGAAGAAGCAAAAAGAGAGCAAATCGTTGACGTTGGATCGGTTGTCGAAACTCTTTCTGCTGACGCTTCTGGTGATGCACCTCTTTACACTCTCGAATCTCTCTGCATGCGCTGTCACCAAAACGGAACTACAAGGTTTTTATTTACTATAATTCCTAACTTCAGGAAGATTTTGCTGTCGGCTTTTGAATGTCCTCATTGTGGTGAGAGGAATAATGAAGTGCAATTTGCTGGTGAAATTCAACCACGTGGTTGCTGTTACTCGCTAAGTATTCCTGCAGGCGAACCAAAGATGCTCGACCGACAAGTGGTAAAATCAGAGTCTGCTACCATTAAGATACCCGAACTCGATTTTGAGATTCCACCAGAGGCACAACGTGGTAGTCTGTCAACGCTTGAAGGGATACTAATGCGAGCTGCTGAGGAACTTCAGGCCCTTCAAGAGGAACGCAGAAAAGTGGCTCCAGAGACAGCTGATGCAATAGATCAATTCTTGGCGAAGTTGCGAGCCTGTGCAACAGCAGAGTCACCCTTCACGCTTATTCTTGATGATCCTGCTGGAAACAGTTTCATTGAAAATCTGTTTGCACCATCACCTGATCCATCATTGACTATCAAGTATTATGAGCGAACTCCTGAGCAACAAGCATTACTGGGATATGTCGCCGATTCTACACAGAATGAAGGTGCTCATGCTGGAGAAACCGTGGTCGCCAGGAGAGCAGGGGGACATCCACATGGGTCAGTCGGGGCAGTAGCTGGTCATCGAGCCATTGCACAGAGTAATAGTGCAGCAATCGCAGATGCCTTTTTTCGATATAGTTCACCTGAAGAGGTGATGACTTTCCCATCAACTTGTGGAACTTGTGTCGCCAAGTGTGAAACTCGAATGTTCGTCACCAATATTCCATATTTCCAAGAAGTGATCGTCATGGCTTCTACATGTGATAATTGTGGTTACCGCAACTCCGAGTTGAAAGCAGGTGGAGCAATTCCTGAAAAAGGAAAAAAGATTACTCTTCGTGTGAAAAATATTAAAGACCTGAGCCGGGATGTGATTAAGTCTGATACTGCATGCGTAAAAGTTCCTGAACTCGAATTGGAGCTGGGAAGCGGCACCCTCGGGGGAATTGTTACAACCGTTGAAGGTTTAATTGTTAAAATCAGTGAAAGTCTTGAAAAGGTCCATGGGTATAGTTTTGGAGATAGTCTTGATGAGAATAGAAGAAGCAAGTGGTTAGACTTTCAAGCCAGGCTAAAAAAGCTTCTTAGCTTGGATGAAGCTTGGACTCTTATTCTTGATGATGCATTGGCTAATTCTTTTGTAGCACCTGCGACTGATGATCTAAAAGATGACGATCAATTAACATTTGAGGAGTATGAGAGGTCATTTGAGCAGAATGAAGATCTAGGTCTGAATGATATGGATACCTCTTCTGCTGATGTGGCGTATGAATCAACAAGCATTACAAGTTGA 1479 0.4395 MEEAKREQIVDVGSVVETLSADASGDAPLYTLESLCMRCHQNGTTRFLFTIIPNFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYSLSIPAGEPKMLDRQVVKSESATIKIPELDFEIPPEAQRGSLSTLEGILMRAAEELQALQEERRKVAPETADAIDQFLAKLRACATAESPFTLILDDPAGNSFIENLFAPSPDPSLTIKYYERTPEQQALLGYVADSTQNEGAHAGETVVARRAGGHPHGSVGAVAGHRAIAQSNSAAIADAFFRYSSPEEVMTFPSTCGTCVAKCETRMFVTNIPYFQEVIVMASTCDNCGYRNSELKAGGAIPEKGKKITLRVKNIKDLSRDVIKSDTACVKVPELELELGSGTLGGIVTTVEGLIVKISESLEKVHGYSFGDSLDENRRSKWLDFQARLKKLLSLDEAWTLILDDALANSFVAPATDDLKDDDQLTFEEYERSFEQNEDLGLNDMDTSSADVAYESTSITS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2701 492 PANTHER ZPR1 ZINC-FINGER DOMAIN PROTEIN 6 488 - -
Mtr4g2701 492 Pfam ZPR1 zinc-finger domain 285 443 IPR004457 GO:0008270
Mtr4g2701 492 Pfam ZPR1 zinc-finger domain 34 193 IPR004457 GO:0008270
Mtr4g2701 492 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Mtr4g2701 492 Gene3D ZPR1, A/B domain 331 473 IPR042451 -
Mtr4g2701 492 Gene3D ZPR1, zinc finger domain 275 330 IPR042452 -
Mtr4g2701 492 Gene3D ZPR1, zinc finger domain 26 79 IPR042452 -
Mtr4g2701 492 SMART zpr1 34 194 IPR004457 GO:0008270
Mtr4g2701 492 SMART zpr1 285 445 IPR004457 GO:0008270
Mtr4g2701 492 Coils Coil 130 150 - -
Mtr4g2701 492 PANTHER ZINC FINGER PROTEIN ZPR1 6 488 IPR040141 -
Mtr4g2701 492 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 286 477 IPR004457 GO:0008270
Mtr4g2701 492 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 36 218 IPR004457 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2701 5 491 C2H2 Transcription Factor Family AT5G22480 73.922 0.0 759