Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2694 ATGGATCAACGCGGTTTCAGAAACTCAACCGGTGGTAATAGCCATAACGGTAACAGTAATGGTGGTGGTGGCAGAGGAAGAGGAAGAGAGTTTCAACAACAATCAAGTCCTGGTGGTCGTGGTGGTCGAGGGTTTACTCAACAACCGCAAAACCGTTGGCAACAAAGGCCAAACCCACCTTCTTCCTTCACACCTTCAACTCCTGCTCCGATCACCAAGCCCAACCCCAACAACCGTCAACCCCCAGTCCAAACTCATCCACAAGTCCAAACTCATCCACTTCCAGATATTGGAGCTCTGAAAATAAAAGAGCAGCCCGTGGAAAATACCACAATTGGACCCATGTTCCGGCCTGACAAGGGAGGGACAGTGTCAATTCGAGACTGCAGACTTCGTGTCAATCATTTTCCGGTTGCTTTCAATCCACAAAGCATTATCATGCACTACGATGTGGACGTGAAGGCTTCTGTGCCACCGAGAAAGGGTTTGCCTCCAAAGAAGATTTCCAAGTCTGACTTGTCTATGATCAGGGACAAATTGTGTGCTGATCATCCTCAGATACTGCCTTTGTTGAAGACTTCATATGATGGAGAGAAGAACATCTTCAGTTCTGTGCCATTGCCTGAAGAAACTTTTACCGTGGAGGTCTCAAAAGGAGAAGATGAAAGAGCTGTTTCTTATACGGTTACTATAACACTGGTGAACAAACTCGAGCTTCGTAAGTTGAGAGATTACCTTAGTGGCAATGTGTATTCCATTCCGAGGGATATTTTGCAGGGAATGGACTTAGTGGTGAAGGAGAATCCGGCAAGGCGCACAGTTTCTTTAGGACGGTGTTTCTTTCCCACCAATCCTCCCTTAATACAGAGAGATCTTGAACCCGGAATAATTGCAATTGGAGGATTTCAACACAGTCTCAAGACCACGGCTCAGGGTTTAGCTTTGTGTCTTGATTATTCAGTTTTGTCTTTTCGAAAGAAAATGTCAGTCTTGGATTTCCTCCATGATCATATTAGAGGTTTCAATTTGGCTGAGTTCAGGAAATATAAGAAATTTGTCGAGGAGGTACTCTTGGGATTGAAAGTAAATGTTACTCACAGAAGAACCAAACAGAAATATACTATTGCTAAGCTAACAGATAAAGATACTCGCCACATCACTTTCCCTATTTTGGACCAAGAGGGCCAAACCCCCCCTAGAAGCACCTCTCTTCTTGCCTACTTTAAAGATAAACATAACTATGATATTCAACACAAAGATATTCCTGCATTGGATTTTGGGGGAAACAAGACTAATTTCGTGCCTATGGAGCTATGCGTCTTGGTTGAGGGTCAGCGATTTCCCAAAGAGTATTTGGACAAGAATGCTGCCAAGAACTTGAAAAATATGTGCTTGGCTAGTCCAAGGGACAGGGAATCTACAATACAAATGATGATGAAGTCTAGTGATGGACCGTGCGGCGGTGGTATTCTTCAGAATTTTGGAATGAATGTCAACACTTCCATGACAAATGTGACCGGACGTGTAATTGGACCTCCAATGTTGAAGTTAGGCGATCCACGTGGAAAGAGTACTCCTATGAAACTGGATCCAGAGAAATGCCATTGGAATCTTGTTGGAAAGTCAATGGTAGAAGGAAAAGCTGTTGAATGTTGGGGCATCCTTGATTTTACCAGCGATGCACCTAATTGGTGCAAATTAAGAGGCAATCAGTTCGTTAACAATCTTATGGATAAGTACAGGAAGTTGGGGATTGTCATGAATGAACCTGTTTGGCATGAGTATTCTGCAATGTGGAAACTTGGGGATTACAATTTACTATGTGAGTTACTTGAAAAAATAAATGAGAAGGTTCAAAAAAAGTGTCGACGGCGGCTACAATTTCTCCTTTGTGTGATGGCCAACAAGGATCCAGGTTACAAGAGCCTCAAGTGGATTGCTGAGACCAAGGTTGGCATAGTGACACAGTGCTGCTTATCTGGTAATGCTAATGAAGGGAAAGACCAATATCTCACAAATCTTGCTTTAAAAATCAATGCAAAAATTGGAGGCAGTAACGTTGAGCTCATTAATAGGCTCCCACACTTTGAGGATGAAAGTCATGTTATGTTTATAGGGGCTGATGTCAATCATCCAGGTTCCCGGGACACAAATAGTCCATCAATTGTTGCAGTGGTTGCCACTACTAACTGGCCAGCTGCAAATCGCTATGCAGCACGTGTTTGCGCTCAAGAGCATTGTACAGAGAAAATTTTGAATTTTGGAGAGATTTGCCTTGACCTTGTTAGACATTATGAGAAGTTGAACAAAGTCAGGCCCCAAAAAATTGTTATCTTTCGTGATGGTGTTAGTGAGAGCCAATTTCACATGGTTCTTGGCGAGGAGTTAAAAGATTTGAAGACCGTGTTTCAGCACTCAAATTACTTTCCAACTATCACTCTTATTGTAGCTCAAAAGCGCCATCAAACTCGATTGTTTCCTGCCGGTGTAAGGGAGGGGGCTCCCAGTGGAAATGTGTTCCCTGGAACAGTTGTGGACACAAAGGTCGTACATCCTTTTGAATTTGACTTTTACCTGTGTAGTCACTATGGAAGCCTAGGTACAAGCAAGCCCACTCACTATCATGTCTTGTGGGATGAGCACAGGTTTACTTCTGATAATTTGCAGAAGCTCATATATGATATGTGCTTTACCTTTGCAAGGTGCACTAAACCTGTATCTTTAGTCCCTCCAGTGTACTATGCTGACCTTGCTGCTTACAGAGGAAGACTATACTATGAAGCAAAGATGTCAACTCAATCTCCATATTCAACTGTATCTTCTTCATCATCACCTTTAGCTTCTTCATCCATTTCATCCACCGCCTCAATTTCAAATGATCCAGGGTTTTACAAGCTGCATCCTGATACGGAAAACGGAATGTTCTTCGTCTGA 2934 0.4291 MDQRGFRNSTGGNSHNGNSNGGGGRGRGREFQQQSSPGGRGGRGFTQQPQNRWQQRPNPPSSFTPSTPAPITKPNPNNRQPPVQTHPQVQTHPLPDIGALKIKEQPVENTTIGPMFRPDKGGTVSIRDCRLRVNHFPVAFNPQSIIMHYDVDVKASVPPRKGLPPKKISKSDLSMIRDKLCADHPQILPLLKTSYDGEKNIFSSVPLPEETFTVEVSKGEDERAVSYTVTITLVNKLELRKLRDYLSGNVYSIPRDILQGMDLVVKENPARRTVSLGRCFFPTNPPLIQRDLEPGIIAIGGFQHSLKTTAQGLALCLDYSVLSFRKKMSVLDFLHDHIRGFNLAEFRKYKKFVEEVLLGLKVNVTHRRTKQKYTIAKLTDKDTRHITFPILDQEGQTPPRSTSLLAYFKDKHNYDIQHKDIPALDFGGNKTNFVPMELCVLVEGQRFPKEYLDKNAAKNLKNMCLASPRDRESTIQMMMKSSDGPCGGGILQNFGMNVNTSMTNVTGRVIGPPMLKLGDPRGKSTPMKLDPEKCHWNLVGKSMVEGKAVECWGILDFTSDAPNWCKLRGNQFVNNLMDKYRKLGIVMNEPVWHEYSAMWKLGDYNLLCELLEKINEKVQKKCRRRLQFLLCVMANKDPGYKSLKWIAETKVGIVTQCCLSGNANEGKDQYLTNLALKINAKIGGSNVELINRLPHFEDESHVMFIGADVNHPGSRDTNSPSIVAVVATTNWPAANRYAARVCAQEHCTEKILNFGEICLDLVRHYEKLNKVRPQKIVIFRDGVSESQFHMVLGEELKDLKTVFQHSNYFPTITLIVAQKRHQTRLFPAGVREGAPSGNVFPGTVVDTKVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHRFTSDNLQKLIYDMCFTFARCTKPVSLVPPVYYADLAAYRGRLYYEAKMSTQSPYSTVSSSSSPLASSSISSTASISNDPGFYKLHPDTENGMFFV* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2694 977 Pfam N-terminal domain of argonaute 127 264 IPR032474 -
Mtr4g2694 977 SMART PAZ_2_a_3 328 475 IPR003100 GO:0005515
Mtr4g2694 977 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 104 976 - -
Mtr4g2694 977 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 104 976 - -
Mtr4g2694 977 Gene3D - 697 977 IPR036397 GO:0003676
Mtr4g2694 977 ProSiteProfiles Piwi domain profile. 628 927 IPR003165 GO:0003676
Mtr4g2694 977 SMART DUF1785_2 274 327 IPR014811 -
Mtr4g2694 977 SMART Piwi_a_2 628 927 IPR003165 GO:0003676
Mtr4g2694 977 Pfam Piwi domain 629 926 IPR003165 GO:0003676
Mtr4g2694 977 Pfam Argonaute linker 1 domain 276 326 IPR014811 -
Mtr4g2694 977 Gene3D - 509 690 - -
Mtr4g2694 977 MobiDBLite consensus disorder prediction 61 81 - -
Mtr4g2694 977 ProSiteProfiles PAZ domain profile. 328 443 IPR003100 GO:0005515
Mtr4g2694 977 Pfam PAZ domain 348 455 IPR003100 GO:0005515
Mtr4g2694 977 SUPERFAMILY PAZ domain 324 480 IPR036085 GO:0005515
Mtr4g2694 977 MobiDBLite consensus disorder prediction 1 21 - -
Mtr4g2694 977 CDD PAZ_argonaute_like 328 442 - -
Mtr4g2694 977 MobiDBLite consensus disorder prediction 29 60 - -
Mtr4g2694 977 CDD Piwi_ago-like 490 926 IPR045246 -
Mtr4g2694 977 SUPERFAMILY Ribonuclease H-like 612 927 IPR012337 -
Mtr4g2694 977 Gene3D paz domain 323 447 - -
Mtr4g2694 977 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2694 Mtr-Chr4 40504620 40509710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2694 116 930 Eukaryotic Initiation Factors Gene Family AT5G43810 35.116 2.18e-144 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2694 K11593 - gmx:100805250 1353.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2694 4 40504620 40509710 Mtr8g2360 8 34073087 34075348 PCT