Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2691 ATGAAAGAAAGTGGAGGTAACAAGAAGCAAGGTGCAGCTTCACCATGTGCTGCATGCAAACTTCTCAGAAGAAGATGTGCTCAAGATTGTCTCTTTGCTCCTTACTTCCCTGCTGATGAGCCTCACAAATTTGCTAATGTTCACAAAGTCTTTGGTGCTAGCAATGTCAACAAGATGCTTCAGGACTTACCTGAGCATCAAAGAGGGGATGCAGTGAGTAGCATGGTGTATGAAGCTAATGCAAGAGTGAGAGACCCTGTGTATGGTTGTGTAGGGGCAATTTCGTCCCTTCAGCAACAGATTGATGTGCTACAAACCCAATTGGCCGTGGCACAAGCTGAGGCAGTGCACCTAAGGGTGCGCCAAACTGCATCATCATTTTGGAACAGTGCAGGACATAGTCCAACTAGCCCAACCTATAGTGGCTCTCCATCATCAAAAATCAATGAATCGCAACAAGCCAAAAATATTTTTGATATGGACATGGTGGTGGACCAAGCTGCCTATGGTGATTCAATGTGGTGA 525 0.4552 MKESGGNKKQGAASPCAACKLLRRRCAQDCLFAPYFPADEPHKFANVHKVFGASNVNKMLQDLPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQTASSFWNSAGHSPTSPTYSGSPSSKINESQQAKNIFDMDMVVDQAAYGDSMW* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2691 174 MobiDBLite consensus disorder prediction 128 150 - -
Mtr4g2691 174 Coils Coil 94 114 - -
Mtr4g2691 174 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
Mtr4g2691 174 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
Mtr4g2691 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 167 - -
Mtr4g2691 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 6 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2691 Mtr-Chr4 40465738 40469381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2691 1 174 AS2 family AT1G31320 71.023 3.46e-75 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr4g2691 LOB 1.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2691 - - jre:108980655 270.396