Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2663 ATGGAAGAGAAACATAGGAAGTTTGTATGCAAATATTGCTTCAAGAGGTTTCCTTGTGGGAAGTCTCTTGGTGGTCACATCAGAACACACATGACAGAAGAAAGAAATAATGCTGCTGCTATTGCTGCTGCTGGTGGTGATGCTGCTGAGCATGTTGCTGCTGGTGTTGGTGATGGTGGAAACCTCATTTATGGTCTAAGAGAAAATCCCAAGAAAACAATGAGGTTTGTGCATTCTCATCATCATCATTATAATCATCATGCTGCTACTGCTGCTGCAACCACATTGGAACAAAATGAAATGATCAAATTCTGCAAAGAATGTGGGAAAGGTTTTCCTTCATTGAAAGCACTTTGTGGACACATGGCTTCTCATTCTGAGAAAGAGAAAAAGATCAACAAGGCTATGATGGAGGAGGATACTCAATCTGATGATACTGATGATGATGATGATGATGTTTGTGTTGCTGCTACAACAATGAATCTAAGGAAATCTAAGAGAAGAATTAGGTTCAAGTCTATTACTCTTTCAAATCAGCAACCTTCTTCTTCTTCTGTTAATGGTGGTTCTTCATCTGTTTCTGAGATGGAACAGGAACAACAAGAAGAGGTTGCTAGATGTTTGATGTTGTTGTCTAGAGATTTTTTTGGTCATAAGGGTCGTTTTGTTTCTGAATCTTCTGATAATAACAATGAGATTGTTCTAGAGACGAAATCCAAGATTGTTATCAGAAATGGTAACAAATTTGTAGCTAATCATGCTCGTGAATTTGTTGCGGAGAAGAAAAAGAAGCTGAAAATGGTTGGGATTGGTGTTTCGAATAATTCAGATTTGAGGGATTTCAGATATGGTTCAAAGAAAATCAAATTTGTAGATTCAAGTGTTCCAAACTATGAATTCAAGAGGCCTAAGGTGGAAGCAGATAAATCTGGATTTGATGATTGTAGAAGCAAATACAATAACAATGTAACAACTATATTTAAGAAATCAGGGATGATGAATAAGGATTTGGATCATGATACAAAGTTCGATTCGAGAAAGAAAGCAAACTCTGAAGGATTTTCTTTTAGCAACAAAAATAAAGAAATCTATGAGAATGGTAGCAAAAGTTTGAAATATGAGTTTTTTGATTATGAAAAGGACAATGATATTTCTTATGATTCAACAACAGATGTTGAGAGTGATGAAGAAAACAGTTCAGAAAGTGATTCTTTTCCTGCTGCAAAATCTCATAACAGTAAAGCTGTGAATAGAAAGAAATTATCATCAAGCAACAAGGGTAAGAAGAAGAAGAAGTTGAAGTCAAAGAAAAGCAAAGAATATGAATGTCCAATTTGCTACAAAATTTTCAGGTCAGGACAAGCATTAGGAGGACATAAAAGATCACATTTTGTTGGAGGATCTGAAGAGAACACTTTTGTGATCAAACAAGCTGCTGCTGCTGTTGCTGTTCCTTGTTTGATTGATCTCAATCTACCTGCTCCTGTTGATGAATAA 1497 0.3587 MEEKHRKFVCKYCFKRFPCGKSLGGHIRTHMTEERNNAAAIAAAGGDAAEHVAAGVGDGGNLIYGLRENPKKTMRFVHSHHHHYNHHAATAAATTLEQNEMIKFCKECGKGFPSLKALCGHMASHSEKEKKINKAMMEEDTQSDDTDDDDDDVCVAATTMNLRKSKRRIRFKSITLSNQQPSSSSVNGGSSSVSEMEQEQQEEVARCLMLLSRDFFGHKGRFVSESSDNNNEIVLETKSKIVIRNGNKFVANHAREFVAEKKKKLKMVGIGVSNNSDLRDFRYGSKKIKFVDSSVPNYEFKRPKVEADKSGFDDCRSKYNNNVTTIFKKSGMMNKDLDHDTKFDSRKKANSEGFSFSNKNKEIYENGSKSLKYEFFDYEKDNDISYDSTTDVESDEENSSESDSFPAAKSHNSKAVNRKKLSSSNKGKKKKKLKSKKSKEYECPICYKIFRSGQALGGHKRSHFVGGSEENTFVIKQAAAAVAVPCLIDLNLPAPVDE* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2663 498 MobiDBLite consensus disorder prediction 413 436 - -
Mtr4g2663 498 SUPERFAMILY beta-beta-alpha zinc fingers 5 34 IPR036236 -
Mtr4g2663 498 ProSitePatterns Zinc finger C2H2 type domain signature. 105 125 IPR013087 -
Mtr4g2663 498 MobiDBLite consensus disorder prediction 387 436 - -
Mtr4g2663 498 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 498 - -
Mtr4g2663 498 SMART c2h2final6 103 125 IPR013087 -
Mtr4g2663 498 SMART c2h2final6 441 463 IPR013087 -
Mtr4g2663 498 SMART c2h2final6 8 30 IPR013087 -
Mtr4g2663 498 MobiDBLite consensus disorder prediction 173 198 - -
Mtr4g2663 498 ProSiteProfiles Zinc finger C2H2 type domain profile. 103 130 IPR013087 -
Mtr4g2663 498 ProSitePatterns Zinc finger C2H2 type domain signature. 443 463 IPR013087 -
Mtr4g2663 498 ProSiteProfiles Zinc finger C2H2 type domain profile. 8 35 IPR013087 -
Mtr4g2663 498 SUPERFAMILY beta-beta-alpha zinc fingers 104 463 IPR036236 -
Mtr4g2663 498 ProSitePatterns Zinc finger C2H2 type domain signature. 10 30 IPR013087 -
Mtr4g2663 498 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 498 - -
Mtr4g2663 498 ProSiteProfiles Zinc finger C2H2 type domain profile. 441 463 IPR013087 -
Mtr4g2663 498 Pfam C2H2-type zinc finger 8 32 - -
Mtr4g2663 498 Pfam C2H2-type zinc finger 105 127 - -
Mtr4g2663 498 Pfam C2H2-type zinc finger 441 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2663 Mtr-Chr4 40221433 40223743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2663 1 498 C2H2 Transcription Factor Family AT1G26610 38.286 4.00e-72 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr4g2663 zf-C2H2_6 2.7e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2663 - - mtr:MTR_4g082980 725.702