Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2635 ATGGCTACAATCTTTTCTGGAGGTTCAGTTTCACTCTTCCCTTTTCACACAAACAAGGGTACATCATCTTTTGCAACCAAAGCTCCAACTCTTCATCTGAAGAAACCTTTCTCTGTCAAATCAGTAGCTTCTCTTGGAACTGAAGCATCAGTGTCTCCAGCAGTTCAAACCTTCTGGAAGTGGCTTCAAGAAGAAGGTGTTATCACTGCCAAGACACCAGTGAAAGCTAGTGTGGTACCAGAAGGTTTAGGATTGGTTGCACTCAAAGATATTTCTAGGAATGATGTTATTTTGCAGGTACCTAAGAGGTTGTGGATAAATCCTGATGCAGTTGCATCTTCAGAGATAGGGAGGGTGTGTAGTAAGTTGACGCCATGGTTGTCTGTTATGCTGTTTCTTATAAGAGAAAGGTCAAGAGAGGATTCTGTTTGGAAGCATTACTTTGGTATTCTGCCACAGGAAACTGATTCTACTATATATTGGTCAGAGGAAGAGCTCCAAGAACTTCAAGGTACTCAACTTCTGAACACAACACTGTCTGTGAAAGAATATGTGAAGAATGAATGTCTGAAACTGGAAAAAGAAATCATTCTCCCTAATAAGAAGCTTTTTCCTTCTCCTGTGACGCTGGATGACTTCTTCTGGGCATTTGGAATTCTCAGATCAAGGGCATTTTCTCGCCTTCGCAATGAAAATCTAGTTGTGATTCCACTGGCAGACTTGATTAACCACAGTGCCAGAGTGACTACAGATGATCATGCTTATGAAGTCAAAGGACCAGCTGGTCTTTTCTCTTGGGATTACCTATTTTCCCTAAGGAGCCCCCTTTCTGTCAAGGCAGGAGAACAGGTGTATATCCAATATGATTTAAACAAAAGCAATGCAGAGTTGGCTCTGGACTACGGTTTCATTGAACCAAATGCAGATCGATATGCATACACCTTGACACTGGGGATATCCGAGTCAGACCCTTTTTTTGACGACAAAGTAGACGTTGCTGAGTCCAATGGTTTTTCTCAGACAGCATACTTTGACATCTTCTATAACCGCCCTCTTCCAGAAGGGATGCTTCCATATCTGAGACTAGTAGCGCTAGGGGGTACCGATGCTTTCTTATTGGAATCACTATTTAGAGACTCCATCTGGGGTCATCTTGAGGTTCCCATGAGCCGTGATAATGAGGAGCTAGTATGCAAAGCAGTTCGAGATGCCTGCAAATCCGCCCTTGCTGGTTATCATACAACCATTGAACAGGATCGCAAACTGAAAGAAGCAAATCTAGAATCAAGGCTTGCAATAGCAGTCGGAATAAGAGAAGGGGAAAAATTGATCCTGCAGCAAATTGATGAGATCTTCGAGCAGAAAGAATTGGAACTAGACCAGTTGGAATACTATCAAGAAAGGAGGCTCAAGGATCTTGGACTTTGCGGTGAAAGTGGTGATGTCCTTGGAGACCTCGCAAAATACTTCTAA 1473 0.427 MATIFSGGSVSLFPFHTNKGTSSFATKAPTLHLKKPFSVKSVASLGTEASVSPAVQTFWKWLQEEGVITAKTPVKASVVPEGLGLVALKDISRNDVILQVPKRLWINPDAVASSEIGRVCSKLTPWLSVMLFLIRERSREDSVWKHYFGILPQETDSTIYWSEEELQELQGTQLLNTTLSVKEYVKNECLKLEKEIILPNKKLFPSPVTLDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTDDHAYEVKGPAGLFSWDYLFSLRSPLSVKAGEQVYIQYDLNKSNAELALDYGFIEPNADRYAYTLTLGISESDPFFDDKVDVAESNGFSQTAYFDIFYNRPLPEGMLPYLRLVALGGTDAFLLESLFRDSIWGHLEVPMSRDNEELVCKAVRDACKSALAGYHTTIEQDRKLKEANLESRLAIAVGIREGEKLILQQIDEIFEQKELELDQLEYYQERRLKDLGLCGESGDVLGDLAKYF* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2635 490 SUPERFAMILY SET domain 52 311 IPR046341 -
Mtr4g2635 490 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 312 483 IPR036464 -
Mtr4g2635 490 Pfam Rubisco LSMT substrate-binding 321 445 IPR015353 -
Mtr4g2635 490 CDD SET_RBCMT 66 304 IPR044431 GO:0016279|GO:0018022
Mtr4g2635 490 PIRSF RMT_SET 1 489 IPR011192 GO:0009507|GO:0030785
Mtr4g2635 490 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 36 482 - -
Mtr4g2635 490 Gene3D set domain protein methyltransferase, domain 1 50 304 - -
Mtr4g2635 490 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 3 488 IPR011192 GO:0009507|GO:0030785
Mtr4g2635 490 Pfam SET domain 82 288 IPR001214 GO:0005515
Mtr4g2635 490 PANTHER [FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC 36 482 - -
Mtr4g2635 490 ProSiteProfiles SET domain profile. 65 289 IPR001214 GO:0005515
Mtr4g2635 490 SMART set_7 72 295 IPR001214 GO:0005515
Mtr4g2635 490 Gene3D - 305 469 IPR036464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2635 Mtr-Chr4 39985103 39988187 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2635 50 244 NAC Transcription Factor Family AT3G56570 29.412 1.43e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr4g2635 SET 2.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2635 K00592 - ag:AAA69903 855.514