Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2633 ATGGGTAGGTCACCTTGTTGTGAGAAAGTTGGATTGAAGAAAGGACCATGGACTGCTGAGGAAGACCAAAAACTCATAGCTTATATTGAAGAATTTGGTCATGGAAGCTGGCGTGCATTGCCTGCAAAAGCTGGGCTTCAAAGATGTGGAAAGAGCTGCAGACTAAGATGGACTAACTACCTTCGACCAGACATAAAAAGAGGAAAGTTTAGTTTGCAGGAAGAGCAAACTATTATTCAACTTCATGCCCTTCTTGGAAACAGATGGTCAGCAATAGCAGCACAACTTCCAAGAAGAACAGACAATGAAATCAAGAACTACTGGAACACACACCTCAAGAAAAGACTAACAAGAATGGGAATAGACCCAACAACTCACAAACCAAAACAGGATCATTCACCTGGAAGTTCCACTTCTCAGTACACCAAAGACTCAGCTAACCTCAGTCACATGGCTCAATGGGAGAGTGCTCGTTTGGAAGCAGAAGCAAGACTTGTTAGAGAAACCAATAAACTGAAAGTTCAAAGACAACTTGAGTTTGAATCCTCCAAACCACAGCCACCTGCAAGACTTTTTCTTAACAAAATCACTCCACTCATTCAACCTTCACTTCCACCTTGTCTTGATATTCTCAAAGCATGGCAAAGTTCATGGTCCAAACCAACAACAAAAGATGACTCAAACAATAACAACAACAAAATGCATAGTATGTATGCTATGATGTTATCCAATGATGATCTTGAATCTCCAACATCCACTTTGAACTTTCCTGGAACAACCTTGCTTCCTTTACCTCTTTCTGTTCCTATGACAAACAATAATATTGAACCATTCAATCAAAGTTTACTTCCTTTAACCAACAGCACCAATAATGACGATGATGATCATGATGATGATGATGAGATATGGAAACAATTCAATTTAACTAAGCATAACACAGAAGGTGGTCATGGTCATGATAACAATAACACCATGTTGAACTTTCAGCAAGATGATGATATTATGGCGGCTGTGGAAGCATTTAGAGCAAGCGGTGGTTTTGATAATAATATTAACACCCCTCCTATTTCAACAAATGTTCTTCAAGTTCTTGAGGGTGGTAATCAGGAAAATTTGGATGGAAGCATGATGTGTAACGTGAATCTCGAGGAGAATAAGCATTATTGGAATAGCATACTTGGTTTGGTTAATGAATCTGATGATATGAACAGTATCCTATAA 1221 0.389 MGRSPCCEKVGLKKGPWTAEEDQKLIAYIEEFGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIAAQLPRRTDNEIKNYWNTHLKKRLTRMGIDPTTHKPKQDHSPGSSTSQYTKDSANLSHMAQWESARLEAEARLVRETNKLKVQRQLEFESSKPQPPARLFLNKITPLIQPSLPPCLDILKAWQSSWSKPTTKDDSNNNNNKMHSMYAMMLSNDDLESPTSTLNFPGTTLLPLPLSVPMTNNNIEPFNQSLLPLTNSTNNDDDDHDDDDEIWKQFNLTKHNTEGGHGHDNNNTMLNFQQDDDIMAAVEAFRASGGFDNNINTPPISTNVLQVLEGGNQENLDGSMMCNVNLEENKHYWNSILGLVNESDDMNSIL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2633 406 CDD SANT 69 112 IPR001005 -
Mtr4g2633 406 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mtr4g2633 406 Gene3D - 13 66 - -
Mtr4g2633 406 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 370 - -
Mtr4g2633 406 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 371 399 - -
Mtr4g2633 406 MobiDBLite consensus disorder prediction 130 145 - -
Mtr4g2633 406 MobiDBLite consensus disorder prediction 121 145 - -
Mtr4g2633 406 CDD SANT 16 61 IPR001005 -
Mtr4g2633 406 SMART sant 66 114 IPR001005 -
Mtr4g2633 406 SMART sant 13 63 IPR001005 -
Mtr4g2633 406 Gene3D - 68 144 - -
Mtr4g2633 406 Coils Coil 151 171 - -
Mtr4g2633 406 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 371 399 - -
Mtr4g2633 406 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 370 - -
Mtr4g2633 406 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mtr4g2633 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mtr4g2633 406 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mtr4g2633 406 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mtr4g2633 406 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mtr4g2633 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2633 Mtr-Chr4 39955647 39958204 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2633 1 399 MYB Transcription Factor Family AT3G01140 46.506 4.21e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr4g2633 Myb_DNA-binding 3.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2633 K09422 - gmx:100799222 471.085