Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2626 ATGGAGAGTAGTGCAAGCTCTGAACTCCCTCCTGGCTTTAGATTTCATCCAACTGATGAGGAACTAATTGTGCATTACCTTTGTAATCAAGCTACATCAAAGCCATGCCCTGCATCTATCATACCAGAAGTTGATATCTATAAATTTGATCCATGGGAATTGCCTGATAAATCTGAGTTTGAGGAAAATGAATGGTATTTCTTTAGCCCAAGAGAAAGAAAGTATCCAAATGGGGTGAGGCCTAATAGAGCAACTTTGTCTGGATATTGGAAAGCTACTGGCACAGACAAGGCAATCAAAAGTGGATCAAAGCAAATTGGTGTGAAGAAATCTTTGGTATTTTACAAAGGTAGACCACCAAAGGGTGTCAAAACTGATTGGATTATGCATGAGTACAGATTGATTGGATCACAAAAACAAACTAGCAAGCATATTGGATCCATGAGGCTAGATGACTGGGTTCTATGCAGGATCTATAAGAAGAAGCACATGGGAAAAACATTGCAGCAAAAAGAGGATTATTCAACACATCAATTTAATGATTCTATAATAACTAATAATGATGATGGTGAACTAGAAATGATGAACCTTACAAGGAGTTGTTCACTTACTTATCTTTTGGATATGAATTACTTTGGTCCAATCTTATCTGATGGTTCAACTTTGGATTTTCAAATCAACAATTCCAATATTGGAATTGACCCCTATGTAAAACCTCAGCCTGTTGAAATGACCAACCATTATGAAGCAGATTCACATAGTAGCATCACCAATCAGCCAATATTTGTGAAACAAATGCATAATTATTTAGCATAA 816 0.364 MESSASSELPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWELPDKSEFEENEWYFFSPRERKYPNGVRPNRATLSGYWKATGTDKAIKSGSKQIGVKKSLVFYKGRPPKGVKTDWIMHEYRLIGSQKQTSKHIGSMRLDDWVLCRIYKKKHMGKTLQQKEDYSTHQFNDSIITNNDDGELEMMNLTRSCSLTYLLDMNYFGPILSDGSTLDFQINNSNIGIDPYVKPQPVEMTNHYEADSHSSITNQPIFVKQMHNYLA* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2626 271 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Mtr4g2626 271 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Mtr4g2626 271 PANTHER NAC TRANSCRIPTION FACTOR 56 5 218 - -
Mtr4g2626 271 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Mtr4g2626 271 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 5 218 - -
Mtr4g2626 271 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2626 Mtr-Chr4 39827782 39829314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2626 1 215 NAC Transcription Factor Family AT1G69490 65.333 9.43e-109 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr4g2626 NAM 1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2626 - - gmx:100785110 409.453