Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2623 ATGGGAATGGTCTATGCAAACATGGAGTCTTTATCACTAAACTATGCAGCTTCTTCTTCATCTCAAGATTGCTATATTTCTAAGGAGGGTGCTACTACTAATTGGTCTTTACCATTTATGAGGGAATGTTATATTGAAAGAAACTTTGAGGAAAACAACAACAGTGATGATGGTGGGGAAGGTGATGGTTCTGATTCTGGTGGTGATGTTGGAGAAAACAGTGAAAAAATTAACCTTAATGAAGATAACCCTAATGAGAATAGTTATGTCAGTGGTAAAGAGGTAGATACTGGTCACTCTAAACTTTGTGCAAGAGGTCATTGGAGACCTGCAGAAGATTCTAAGCTTAAAGAACTTGTTGCTCTTTATGGTCCTCAGAACTGGAATCTCATAGCTGAAAAGCTAGAAGGCAGATCAGGTAAGAGTTGTAGGCTAAGATGGTTCAACCAATTGGATCCAAGGATTAATAGAAGAGCTTTTAGTGATGAAGAGGAAGAAAGATTAATGCAAGCTCATAGAATTTATGGTAACAAATGGGCCATGATTGCTAGGCTTTTCCCTGGAAGAACTGATAATGCTGTTAAGAATCACTGGCATGTTATAATGGCAAGAAAGTACAGAGAACAATCAAGTGCTTACAGAAGGAGGAGGCTGAATCAATCTGTTTACAGAAGAATGGAAGAGAATACAAGCTTTGTCTCTAGGGATATAGTCACAGCCACAGGAATGGAACCAGTACCACCACCACCTTATTATATTAACCTCCCAAATGGAACACTTGGCTATAACATGGCTAGTTTTCCATATTCAACTTTCCACGGTGTAGTTGATGGTGGTGTTGAGTGTGGCTTAAATGGTTCAACTCATTTGACTAGTAGTAAAGAAGCAATCTCAAGTGACAAGCAAGCACCTACTCCTATTGGCTTGTTTGCTCAACAATCACCACTTGATTTCTTTTCTGGAGGTAGAAGAAATGAGTATTATAGCCAAATGAGAAGCTGGGATAGGCCAAGTGATTTACATGAAAATCAACCAACACCAACACCAAGTGGTTTCTACCATGAATATCCACAATATATGATGCCAATGCAACAACAAAACAACAATTTTTACAGTTTCACATCAAATATTTCCACCACAGCAGCAACAACATTAGGCAGTGAAGTTTCACTATCATCAGTGGCAGCAGCAGCAGAAAATCACAGAGATCAAGTTCTGATGAGTAATCCCCTCCTTCAGATGCAATTCCATTTATTGACTTCCTTGGAGTAG 1272 0.3899 MGMVYANMESLSLNYAASSSSQDCYISKEGATTNWSLPFMRECYIERNFEENNNSDDGGEGDGSDSGGDVGENSEKINLNEDNPNENSYVSGKEVDTGHSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSDEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLNQSVYRRMEENTSFVSRDIVTATGMEPVPPPPYYINLPNGTLGYNMASFPYSTFHGVVDGGVECGLNGSTHLTSSKEAISSDKQAPTPIGLFAQQSPLDFFSGGRRNEYYSQMRSWDRPSDLHENQPTPTPSGFYHEYPQYMMPMQQQNNNFYSFTSNISTTAATTLGSEVSLSSVAAAAENHRDQVLMSNPLLQMQFHLLTSLE* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2623 423 MobiDBLite consensus disorder prediction 71 94 - -
Mtr4g2623 423 MobiDBLite consensus disorder prediction 50 94 - -
Mtr4g2623 423 PANTHER MYB PROTEIN-RELATED 1 410 - -
Mtr4g2623 423 ProSiteProfiles Myb-like domain profile. 105 151 IPR001005 -
Mtr4g2623 423 PANTHER MYB TRANSCRIPTION FACTOR 1 410 - -
Mtr4g2623 423 Pfam Myb-like DNA-binding domain 108 168 - -
Mtr4g2623 423 CDD SANT 108 149 IPR001005 -
Mtr4g2623 423 Gene3D - 158 229 - -
Mtr4g2623 423 SUPERFAMILY Homeodomain-like 105 198 IPR009057 -
Mtr4g2623 423 Gene3D - 105 156 - -
Mtr4g2623 423 SMART sant 104 153 IPR001005 -
Mtr4g2623 423 SMART sant 156 204 IPR001005 -
Mtr4g2623 423 CDD SANT 159 199 IPR001005 -
Mtr4g2623 423 ProSiteProfiles Myb-like domain profile. 152 202 IPR001005 -
Mtr4g2623 423 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 151 IPR017930 -
Mtr4g2623 423 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 152 206 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2623 Mtr-Chr4 39745683 39747942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2623 83 217 MYB Transcription Factor Family AT1G69560 76.923 1.10e-76 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr4g2623 Myb_DNA-bind_6 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2623 K09422 - vvi:100253313 416.387