Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2618 ATGAGTTTCATTACTTATATTCTATTTGCTCTTTCTCTTATTGTCTCCAATTCCATAGCCAGTGATGACACATCATCCATCATTACTCAATCGCAATCCATCAGTGATGGAGAGACCATTGTTTCACCAAAAGGACTCTTTGAGCTTGGTTTCTTCAGTATTACAAATCCAAACAAACGCTACCTCGGAATCCGATTCAAGAATATTCCAACTCAAAATGTTGTTTGGGTTGCAAATGGTGGCATACCAATCAATGACTCTTTTGCCATTTTGAAACTAAACAGTTCTGGAAGTTTGGTCCTTACTCACGAAAACAACATTATTTGGTTCACAAATTCTTCCACAAATGTACAGAAACCAGTTGCACAACTCTTGGATACTGGCAATCTTGTCATAAAAGATAATGGCAATGAAACCTATTTGTGGCAAAGCTTTGACTATCCATCTAACACATTTTTGTCAGGTATGAAGTTGGGATGGGACCATAAAAGAAATTTGAATAGGCGTCTCATAGCATGGAAGAGCGATGATGATCCAACCCCCGGAGACTTTTCTTGGGGTGTTGTATTGAATCCGTATCCTGATATCTATATGATGAAGGGAGAAAAAAAGTACTACAGACTTGGACCATGGAACGGCTTGCGTTTTAGTGGTAGGCCAGAGATGAAGCCTAATTCTATTTTCAGTTACAATTTTGTCTGCAATAAAGAAGAGGTTTATTACACATGGAACATCAAAGATAGTACTCAAATATCAAAAGTGGTACTTAACCAAACCAGTAACGATCGTCCACGATACGTATGGTCAAAGGACGACAAATCATGGAATATTTATTCAAGAATACCAGGAGACGATTGTGACCATTATGGTCGATGTGGAGTCAATGGATATTGCAGCATTTCTAATTCACCAATATGTGAATGTTTAAAAGGGTTCAAGCCTAAGTTTCCTGAAAAATGGAACTCAATAGATTGGTCCCAAGGATGTGTCAGGAATCATCCATTGAACTGCACCAATGATGGATTTGTCTCATTGGCAAGCTTGAAAGTTCCTGATACTACATATACTTTGGTGGACGAGAGTATTGGTCTAGAACAATGTAGAGTAAAATGCTTGAATAACTGTTCCTGCATGGCTTATACAAATACAAATATAAGTGGAGCACGGAGTGGTTGTGTTATGTGGTTCGGTGATTTAACTGATATCAAACATATTCCAGATGGTGGGCAAGTTCTATATATAAGGATGCCTGTTTCAGAATTAGATAAAGTCAACGACAGGAAGAACACGAGAAAAATAGTAGTAATTACAGTGTGTGCAGCTTTGGGAATGCTTTTACTTGCTGTTTATTTTTTCTGCAGATTCAGGAGGAGCATTGTTGGGAAGACAAAGACAGAAGGCAACTATGTAAGGCACCTGGATGATCTGGATATCCCATTGCTTAACTTGTCAACAATTATTACTGCTACTGACAATTTCTCAGAGAAGAACAAAATTGGAGAAGGTGGTTTTGGACCTGTATATTTGGGAAAGTTTGAGTGTGGGTTAGAAATTGCTGTAAAAAGACTTTCACAGAGCTCAGCACAAGGGATTCGAGAATTCATAAATGAAGTAAAACTTATTGCAAATGTTCAGCACCGAAATCTTGTAACGCTTATTGGTTGCTGCATTGAGAGAGAAGAAAAAATGTTAGTTTATGAATACATGGCTAATGGTAGCCTAGACTACTTCATTTTTGATCGTACCAAAAGTAAATTGCTAGATTGGCCAAAACGTTTCCACATAATCTGTGGAATTGCTAGAGGGCTTATGTATCTTCATCAAGATTCTCGATTGAGGATTGTCCATAGAGACCTCAAAAGCAGCAATGTTTTACTAGATGATACTTTGAATCCAAAAATATCAGATTTTGGATTGGCTAGAACTTTTGGAGGAAACCAAATTGAAGGAAACACAAATAGAATTGTTGGGACGTATGGGTACATGGCACCAGAGTATGCTATTGATGGACAATTTTCCGTGAAATCCGACGTTTTCAGCTTTGGTATTTTATTGTTAGAGATTATATGTGGGAAGAAAAATCGAGTGTGTCATCGTACAAAGCAAACTCTTAACCTTGTTGCTTATGCATGGACATTCTGGAAACATGGAAGACCTTTACAGATAATTGACTCAAACATAGTGGATTCGTGCATTGTATCTGAAGTATCGCGTTGCATCCACATTGGACTCTTATGTGTGCAACAATATCCAGAGGATAGGCCTACCATGGCTGATGTGATTCTAATGTTAGGGAGTGAGATGATGGCATTAGATGAACCCAAGGAGCCAGGTTCTATTACGAGGAAAGAATCTGTTGAAGCAAATTCAAGCTCAAGTGGGAAGGATACAAGTTCAAACTATGAAATGACAATGAGCTCTTTTAGTGCTCGGTGA 2436 0.3818 MSFITYILFALSLIVSNSIASDDTSSIITQSQSISDGETIVSPKGLFELGFFSITNPNKRYLGIRFKNIPTQNVVWVANGGIPINDSFAILKLNSSGSLVLTHENNIIWFTNSSTNVQKPVAQLLDTGNLVIKDNGNETYLWQSFDYPSNTFLSGMKLGWDHKRNLNRRLIAWKSDDDPTPGDFSWGVVLNPYPDIYMMKGEKKYYRLGPWNGLRFSGRPEMKPNSIFSYNFVCNKEEVYYTWNIKDSTQISKVVLNQTSNDRPRYVWSKDDKSWNIYSRIPGDDCDHYGRCGVNGYCSISNSPICECLKGFKPKFPEKWNSIDWSQGCVRNHPLNCTNDGFVSLASLKVPDTTYTLVDESIGLEQCRVKCLNNCSCMAYTNTNISGARSGCVMWFGDLTDIKHIPDGGQVLYIRMPVSELDKVNDRKNTRKIVVITVCAALGMLLLAVYFFCRFRRSIVGKTKTEGNYVRHLDDLDIPLLNLSTIITATDNFSEKNKIGEGGFGPVYLGKFECGLEIAVKRLSQSSAQGIREFINEVKLIANVQHRNLVTLIGCCIEREEKMLVYEYMANGSLDYFIFDRTKSKLLDWPKRFHIICGIARGLMYLHQDSRLRIVHRDLKSSNVLLDDTLNPKISDFGLARTFGGNQIEGNTNRIVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIICGKKNRVCHRTKQTLNLVAYAWTFWKHGRPLQIIDSNIVDSCIVSEVSRCIHIGLLCVQQYPEDRPTMADVILMLGSEMMALDEPKEPGSITRKESVEANSSSSGKDTSSNYEMTMSSFSAR* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2618 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Mtr4g2618 811 MobiDBLite consensus disorder prediction 783 811 - -
Mtr4g2618 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 179 IPR036426 -
Mtr4g2618 811 CDD PAN_AP_plant 333 417 - -
Mtr4g2618 811 Pfam Protein tyrosine and serine/threonine kinase 496 761 IPR001245 GO:0004672|GO:0006468
Mtr4g2618 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Mtr4g2618 811 Pfam PAN-like domain 337 402 IPR003609 -
Mtr4g2618 811 SMART blect_4 31 148 IPR001480 -
Mtr4g2618 811 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Mtr4g2618 811 MobiDBLite consensus disorder prediction 773 811 - -
Mtr4g2618 811 CDD B_lectin 31 148 IPR001480 -
Mtr4g2618 811 Pfam D-mannose binding lectin 74 174 IPR001480 -
Mtr4g2618 811 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 810 - -
Mtr4g2618 811 Pfam S-locus glycoprotein domain 206 316 IPR000858 GO:0048544
Mtr4g2618 811 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Mtr4g2618 811 Gene3D Phosphorylase Kinase; domain 1 459 568 - -
Mtr4g2618 811 SUPERFAMILY Protein kinase-like (PK-like) 480 795 IPR011009 -
Mtr4g2618 811 CDD STKc_IRAK 499 764 - -
Mtr4g2618 811 SMART serkin_6 493 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2618 811 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 33 810 - -
Mtr4g2618 811 ProSiteProfiles Protein kinase domain profile. 493 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2618 811 Gene3D - 20 145 IPR036426 -
Mtr4g2618 811 ProSiteProfiles EGF-like domain profile. 282 318 IPR000742 -
Mtr4g2618 811 SMART ntp_6 337 416 IPR003609 -
Mtr4g2618 811 Gene3D Transferase(Phosphotransferase) domain 1 569 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2618 Mtr-Chr4 39678338 39682352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2618 433 796 Receptor kinase-like Gene Family AT4G23190 51.630 1.96e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g2618 PK_Tyr_Ser-Thr 4.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2618 - - mtr:MTR_4g081750 1361.67