Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2617 ATGCTATTTGGTAGCCTATCAATTAGTATCATAGTCATACACTTAGATGAATCATTGATTAAAAAAAAAATACAATCATCAACATCCAAATACAAGTGTCATGCAATGGGAATTATTTCTTTCATGATTATGATTATGATTATTTCTTACATAATTGTCCCCCCCATTCTAGCAAGTAATTCCATCAATGTGTCTGAGTCTTTAAGTGATGGAGAAACCTTAATTTCAGCAGGTGGAAAATTTGAACTGGGTTTCTTCAGCCCAGGCAATTCTGTAAGACGTTACCTTGGGATTTGGTACAAGCAGATGCCTATACAGAAAGTTGTTTGGGTTGCAAATAGGGTCAACCCCATCAACAATACCTTAGGCATCTTAACACTGACCACCTCAGGGAATCTCATGCTCCGCCAAAACGACTCTCTTGTTTGGAGCACAACAACACAGAAACAAGCACAGAAACCAATGGCAGAGCTCTTGGATAGTGGCAATCTTGTCATAAGAAACCAGGATGAAACAGACTACTTGTGGCAAAGCTTTGACTATCCCTGTGATACAATTTTGCCAGGGATGAAGTTAGGATGGGATCTCAGAAATGATCTCGAACGGAGAATAACTTCTTGGAAGAGTCCTGATGATCCATCTCCAGGTGATCTTTCTTGGGGTCTTGTGCTTCATAACTATCCAGAGTTTTATCTGATGAACAGAACAGAGAAATACTGTCGGCTTGGACCATGGAATGGACTTCAATTTAGTGGTTTGTCGGATCGAAAACAAAACTCTATATATGATTTCAAGTATGTTGCTAATAACGATTTGAATTATGTGTCTAATAAGGATGAGATGTTCTACTCCTTTACCCTCAAGAATTCTTCTGCATTCGTTAGTGCTACAATATACCAAACAAATATTTCAATCTATGTGTGGGAGGAGAATAATACGAATTGGTTGCTTACTGAAAGTACCCCGTTGAACTCCTGTGAATCATATGGGATTTGTGGGCCATATGCCAGTTGCTCAACTACAAAGTCACCAGCTTGCCAATGTTTACGTGGGTTCATTCCAAAGTCAACGCAGCAATGGGCCTTAAGAGACTGGAGTCAAGGGTGTGTCCGTAATATATCATTAAGCTGCAACAACCAACAAATGGATGTGGATGATGAGTTGATGAAATATGTGGGTCTCAAAGTACCGGATACTACACATACTTTGTTGTATGAGAATGTTGATTTAGAGTTATGCAGAACCATGTGCTTGAATAATTGTTCTTGTACAGCTTTCACTAATTCAGACATAAGTGGAAAGGGCAGTGGCTGTGTCATGTGGTTTGGTGATCTAATTGACATAAGACAATTTGACACTGGTGGTCAAGATCTCTATATCCGTATAGCTCGGGTAGTAACAGAGGCTTCAAATGGGCGTAACAAAAGTGTGATAACCATAGCTGCCACCACTGCTGCTGCAATTTTTGGGATGCTCTTATTCTGCAGTTATATCATATATAAAGTCCGATGGAGAATTGCTGATAAGTCAAAGATAGACGATAACATTGAAAGACATCTAGAAGATCTGGATTTACCTTTGTTTGATCTGCAAACAATTACTAGTGCCACTAACAACTTCTCGTTGAATAATAAGATTGGACAAGGTGGTTTTGGATCTGTATACAAGGGAAAGTTAGCGGATGGGCAAGAAATTGCTGTCAAGAGACTTTCAACAAACTCTGGACAAGGAATTACTGAGTTCTTAACAGAAGTAAAACTGATTGCAAAACTTCAACACCGAAATCTGGTTAAGCTTCTTGGCTGTTGTGTTGGAAGACAAGAAAAATTTCTAGTATATGAATACATGGCTAACGGTAGCCTTGACTCCTTTATCTTTGATAAAATAACAGATAAATTGCTGGAGTGGCCACAACGCTTCGAAATAATATTTGGAGTAGCGAGGGGACTTGTGTATCTTCATCAAGATTCTCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTGTTGGATCACAAGTTGAACCCAAAAATATCAGATTTTGGAATGGCTAGATCTTTTGGAGGAGACCAGATTGAAGGAAATACACATAGAGTAGTTGGAACATACGGATACATGGCACCAGAGTATGCCATTGGTGGACAATTTTCAATCAAATCAGATGTTTTCAGCTTTGGTGTTTTACTACTAGAGATTATATGTGGGAACAAAAATAGTGCACTTTATCATGGAAACGAGACACTAAACCTTGTTGGTTATGCATGGAGAGTTTGGAAAGAGGGAAAAGCATTAGAGTTGATTGAGTCAAGAATAAAGGAATCATGTGTTGTATCAGAGGTATTAAGATGCATACATGTGAGTCTGTTGTGTGTGCAACAATACCCGGAGGACAGACCTACAATGACATCTGTTATTCAAATGTTAGGTAGTGATATGGAATTGGTTGAGCCTAAAGCACCTGGTTTCTGTCAAAGGAAGGTATCTTCTGACGAAGAGTCACCAAATCAAAATGAAATTAGTTCAAATGATGAATTAACCATTACATCGCTAAATGGACGATGA 2571 0.3855 MLFGSLSISIIVIHLDESLIKKKIQSSTSKYKCHAMGIISFMIMIMIISYIIVPPILASNSINVSESLSDGETLISAGGKFELGFFSPGNSVRRYLGIWYKQMPIQKVVWVANRVNPINNTLGILTLTTSGNLMLRQNDSLVWSTTTQKQAQKPMAELLDSGNLVIRNQDETDYLWQSFDYPCDTILPGMKLGWDLRNDLERRITSWKSPDDPSPGDLSWGLVLHNYPEFYLMNRTEKYCRLGPWNGLQFSGLSDRKQNSIYDFKYVANNDLNYVSNKDEMFYSFTLKNSSAFVSATIYQTNISIYVWEENNTNWLLTESTPLNSCESYGICGPYASCSTTKSPACQCLRGFIPKSTQQWALRDWSQGCVRNISLSCNNQQMDVDDELMKYVGLKVPDTTHTLLYENVDLELCRTMCLNNCSCTAFTNSDISGKGSGCVMWFGDLIDIRQFDTGGQDLYIRIARVVTEASNGRNKSVITIAATTAAAIFGMLLFCSYIIYKVRWRIADKSKIDDNIERHLEDLDLPLFDLQTITSATNNFSLNNKIGQGGFGSVYKGKLADGQEIAVKRLSTNSGQGITEFLTEVKLIAKLQHRNLVKLLGCCVGRQEKFLVYEYMANGSLDSFIFDKITDKLLEWPQRFEIIFGVARGLVYLHQDSRLRIIHRDLKASNVLLDHKLNPKISDFGMARSFGGDQIEGNTHRVVGTYGYMAPEYAIGGQFSIKSDVFSFGVLLLEIICGNKNSALYHGNETLNLVGYAWRVWKEGKALELIESRIKESCVVSEVLRCIHVSLLCVQQYPEDRPTMTSVIQMLGSDMELVEPKAPGFCQRKVSSDEESPNQNEISSNDELTITSLNGR* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2617 856 PIRSF SRK 32 856 IPR024171 GO:0004674
Mtr4g2617 856 MobiDBLite consensus disorder prediction 828 856 - -
Mtr4g2617 856 CDD STKc_IRAK 546 811 - -
Mtr4g2617 856 CDD B_lectin 65 182 IPR001480 -
Mtr4g2617 856 Pfam D-mannose binding lectin 108 208 IPR001480 -
Mtr4g2617 856 MobiDBLite consensus disorder prediction 831 856 - -
Mtr4g2617 856 ProSiteProfiles Bulb-type lectin domain profile. 59 179 IPR001480 -
Mtr4g2617 856 SUPERFAMILY Protein kinase-like (PK-like) 522 811 IPR011009 -
Mtr4g2617 856 SUPERFAMILY alpha-D-mannose-specific plant lectins 108 213 IPR036426 -
Mtr4g2617 856 SMART serkin_6 540 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2617 856 CDD PAN_AP_plant 375 463 - -
Mtr4g2617 856 Gene3D Phosphorylase Kinase; domain 1 501 615 - -
Mtr4g2617 856 ProSiteProfiles PAN/Apple domain profile. 377 463 IPR003609 -
Mtr4g2617 856 Gene3D Transferase(Phosphotransferase) domain 1 616 821 - -
Mtr4g2617 856 SMART ntp_6 383 462 IPR003609 -
Mtr4g2617 856 SMART blect_4 65 182 IPR001480 -
Mtr4g2617 856 Pfam PAN-like domain 385 448 IPR003609 -
Mtr4g2617 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Mtr4g2617 856 Pfam S-locus glycoprotein domain 241 356 IPR000858 GO:0048544
Mtr4g2617 856 ProSiteProfiles Protein kinase domain profile. 540 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2617 856 Gene3D - 56 179 IPR036426 -
Mtr4g2617 856 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 68 855 - -
Mtr4g2617 856 ProSitePatterns Protein kinases ATP-binding region signature. 546 568 IPR017441 GO:0005524
Mtr4g2617 856 Pfam Protein tyrosine and serine/threonine kinase 541 811 IPR001245 GO:0004672|GO:0006468
Mtr4g2617 856 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 68 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2617 Mtr-Chr4 39662191 39666937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2617 474 825 Receptor kinase-like Gene Family AT4G23230 53.541 3.04e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g2617 PK_Tyr_Ser-Thr 2.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2617 - - gmx:100812007 1115.14