Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2616 ATGAGTTTCATTACTTATATTCTATTTGCTCTTTCTCTTATTGTCTCCAATTCCATAGCCAGTGATGACACATCATCCATCATTACTCAATCTCAATCCATCAGTGATGGAGAGACCATTGGTTCACCAAAAGGACTCTTTGAGCTTGGTTTCTTCAGTATTACAAATCCAAACAAACGCTACCTCGGAATTCGATTCAAGAATATTCCAACTCAAAATGTTGTCTGGGTTGCAAATGGTGGCAAGCCAATCAATGACTCTTCTGCCACTTTGAAATTAAACAGCTCTGGCAGTTTGGTTCTTACTCATAACAACGACATTGTTTGGTTCACAAATTCTTCCACAAATGTACAGAAACCAGTGGCACAACTCTTGGATACTGGCAATCTTGTTGTAAAAGATAGTGTAACGGAAACCTATCTGTGGCAAAGCTTTGACTATCCATCTAATACATTGTTGTCAGGTATGAAATTGGGATGGGACCGCAAAAAAAAATTGAATAGGCGTCTCACAGCATGGAAGAGTGACGATGATCCAACCCCGGGGGACTTTTCTTGGGGTGTTGTATTGAATCCGTATCCTGAAATCTATATGATGAAGGAAGAACAAAAGTACTACAGATTTGGACCATGGAACGGCTTGCGTTTTAGTGGTAGGCCAGATATGAAGCCTAATAACGTTTACAATTACAACTTCATCTGCAATAAAGAAGAGGTTTATTACACATGGAACATCAAAGATAGTTCACTAATATCAAAAGTGGTACTTAACCAAACCAGTTATGAACGTCCACGCTACATATGGTCAAAAGACGACGAATTATGGATGCTTTATTCAAAAATACCAGCAGACTATTGTGACCACTATGGTCTATGTGGAGTCAATGGATACTGCAGCAGTACTAATTCACCAACATGTGAATGTTTAAAAGGGTTTAAGCCTAAGTTTCCTGAAAAATGGAACTCGATGGATTGGTCCCAAGGATGTGTCAGGAATCATCCATTGAACTGCACCAATGATGGGTTTGTCTCCGTGGCAAACTTGAAAGTACCGGATACTACATATACTTTGGTGGATGAGAGTATAGGTCTAGACCAATGTAGAGGCAAATGCTTGAATAATTGTTCATGCATGGCCTATACAAATACAAATATAAGTGGAGCAGGAAGTGGTTGTGTTATGTGGTTTGGTGATTTAATTGATATCAAACTTATTCCAGTTGGTGGGCAAGGTCTATATATCAGGATGCCTGCTTCGGAATTAGACAAAGCCAACAATAATACTGAGGACGAGCACAGGACGAACTCGAGAAAAATAGTTGTAATAACAGTTTCTGCAGCTTTGGGAATGCTTTTACTTGCTATTTATTTTTTCTACAGACTCAGGAGGAGCATTGTTGGGAAGTTAAAGACAAAAGGTAACTTTGAAAGACACATGGACGATCTGGATCTCCCATTGCTTGATTTGTCAACAATTATTACTGCTACTGACAATTTCTCAGAGAAGAACAAAATTGGAGAAGGTGGTTTTGGAACTGTATATTTGGGAAAATTAGGGAGTGGGCTAGAAATTGCTATAAAGAGACTTTCACAGGGCTCAAGACAAGGGACGAGAGAGTTCATAAATGAAGTAAAACTTATTGCAAATGTTCAGCACCGAAATCTTGTAAAGCTTATTGGCTGTTGCATTGAGAGAGAAGAAAAAATGTTAGTTTATGAATACATGGCTAATGGTAGCCTGGACTACTTCATTTTTGATCGTACCAAAAGTAAATTGCTAGATTGGCCAAAGCGTTTCCACATAATCTGTGGAATTGCTAGAGGGCTTATGTATCTTCATCAAGATTCTCGATTGCGGATTGTCCATAGAGATCTCAAAACAGGTAATGTTTTACTAGATGATACTTTGAATCCAAAAATATCAGATTTTGGATTGGCTAGAACTTTTGGAGGAAACCAAATTGAAGGAAACACAGATAGAATTGTTGGGACATATGGGTACATGGCACCAGAGTATGCTATTGATGGACAATTTTCCGTGAAATCCGACGTTTTCAGCTTTGGTATTTTACTGTTAGAGATTATATGTGGCAAGAAAAATCGAGTGTGTCATCGTACAAAGCAAACTCTTAACCTTGTTGCTTACGCATGGACATTCTGGAAGCATGGAAGACCTTTACAGATAATTGACTCAAACATAGTGGATTCATGCATTGTATCTGAAGTATCGCGTTGCATCCACGTTGGACTCTTATGTGTGCAACAATATCCAGAGGATAGGCCTACCATGGCTGATGTGATTCTAATGTTAGGGAGTGAGATGATGACATTAGATGAGCCTAAGGAGCCAGGTTTTACTACGAGGAAAGAATCTGCTGAAGCAAATTCAAGCTCAAGTGGGAAGGATACAAGTTCAAACTATGAAATGACAATGAGCTCTTTTAGTGCTCGGTGA 2454 0.3892 MSFITYILFALSLIVSNSIASDDTSSIITQSQSISDGETIGSPKGLFELGFFSITNPNKRYLGIRFKNIPTQNVVWVANGGKPINDSSATLKLNSSGSLVLTHNNDIVWFTNSSTNVQKPVAQLLDTGNLVVKDSVTETYLWQSFDYPSNTLLSGMKLGWDRKKKLNRRLTAWKSDDDPTPGDFSWGVVLNPYPEIYMMKEEQKYYRFGPWNGLRFSGRPDMKPNNVYNYNFICNKEEVYYTWNIKDSSLISKVVLNQTSYERPRYIWSKDDELWMLYSKIPADYCDHYGLCGVNGYCSSTNSPTCECLKGFKPKFPEKWNSMDWSQGCVRNHPLNCTNDGFVSVANLKVPDTTYTLVDESIGLDQCRGKCLNNCSCMAYTNTNISGAGSGCVMWFGDLIDIKLIPVGGQGLYIRMPASELDKANNNTEDEHRTNSRKIVVITVSAALGMLLLAIYFFYRLRRSIVGKLKTKGNFERHMDDLDLPLLDLSTIITATDNFSEKNKIGEGGFGTVYLGKLGSGLEIAIKRLSQGSRQGTREFINEVKLIANVQHRNLVKLIGCCIEREEKMLVYEYMANGSLDYFIFDRTKSKLLDWPKRFHIICGIARGLMYLHQDSRLRIVHRDLKTGNVLLDDTLNPKISDFGLARTFGGNQIEGNTDRIVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIICGKKNRVCHRTKQTLNLVAYAWTFWKHGRPLQIIDSNIVDSCIVSEVSRCIHVGLLCVQQYPEDRPTMADVILMLGSEMMTLDEPKEPGFTTRKESAEANSSSSGKDTSSNYEMTMSSFSAR* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2616 817 SUPERFAMILY Protein kinase-like (PK-like) 486 802 IPR011009 -
Mtr4g2616 817 Pfam D-mannose binding lectin 74 174 IPR001480 -
Mtr4g2616 817 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672|GO:0006468
Mtr4g2616 817 Gene3D Phosphorylase Kinase; domain 1 463 574 - -
Mtr4g2616 817 CDD PAN_AP_plant 333 417 - -
Mtr4g2616 817 SMART blect_4 31 148 IPR001480 -
Mtr4g2616 817 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Mtr4g2616 817 MobiDBLite consensus disorder prediction 778 817 - -
Mtr4g2616 817 CDD B_lectin 31 148 IPR001480 -
Mtr4g2616 817 ProSiteProfiles Protein kinase domain profile. 499 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2616 817 MobiDBLite consensus disorder prediction 789 817 - -
Mtr4g2616 817 Pfam Domain of unknown function (DUF3403) 772 817 IPR021820 GO:0004674
Mtr4g2616 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 816 - -
Mtr4g2616 817 Gene3D - 20 145 IPR036426 -
Mtr4g2616 817 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 33 816 - -
Mtr4g2616 817 ProSiteProfiles EGF-like domain profile. 282 318 IPR000742 -
Mtr4g2616 817 Pfam PAN-like domain 337 402 IPR003609 -
Mtr4g2616 817 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Mtr4g2616 817 SMART serkin_6 499 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2616 817 SMART ntp_6 337 416 IPR003609 -
Mtr4g2616 817 CDD STKc_IRAK 505 770 - -
Mtr4g2616 817 Gene3D Transferase(Phosphotransferase) domain 1 575 784 - -
Mtr4g2616 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Mtr4g2616 817 Pfam S-locus glycoprotein domain 206 316 IPR000858 GO:0048544
Mtr4g2616 817 ProSiteProfiles PAN/Apple domain profile. 337 417 IPR003609 -
Mtr4g2616 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 179 IPR036426 -
Mtr4g2616 817 PIRSF SRK 1 817 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2616 Mtr-Chr4 39655765 39676444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2616 422 802 Receptor kinase-like Gene Family AT4G23190 49.740 6.68e-127 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g2616 PK_Tyr_Ser-Thr 6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2616 - - mtr:MTR_4g081750 1206.43