Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2615 ATGGACATTCTTTTTTTCATGATTATGAGTATGGTGATTTCTTACATAATTGTCCCCTCTATTCTAGCAAGTAATTCCATCAGTGCGTCTGAGTCTTTAACTGACGGCAAAACCTTAGTTTCAAAAGGTGGACAGTTTGAGCTGGTTTTCTTCAGTCCAGGCAATTCTACAAGACGTTACCTTGGAATTTGGTACAAACAGATTCCTATACAGAAAGTTGTTTGGGTTGCAAATAGGGTCAACCCCATCAACAATACTTTAGGCATCTTAACACTGACCACCTCAGGCAATCTCATGCTCCGCCAAAACGACTCTCTTGTTTGGAGCACAACGTCAGCGAAACAAGCAAAGAAACCAATGGCAGAGCTCTTGGATAGTGGCAATCTTGTCATAAGAAACCAAGAAGAAACAGACCCAGAAGGAGGCTATTTGTGGCAAAGCTTTGACTATCCCTGTGATACAATTTTGCCAGGGATGAAGTTAGGATGGGATCTCAGAAATGATCTCGAACGGAGAATAACTTCTTGGAAGAGTCCTGATGATCCATCTCCAGGTGATCTTTCTTGGGGTCTTGTGCTTCATAACTATCCAGAGTTTTATCTGATGAATGGAGCAGTTAAATACTGTCGGATGGGACCATGGAATGGACTTCAATTTAGTGGCCTGTCAGATCGAAAACAAAGTTCTGTATATGATTTAAAGTATGTTGCTAATAATGATTTGAATTATGTGTCTAATAAGGATGAGATGTTTTACTCCTTTACCCTCAAGAATTCTTCTGCCCTAGTTACTATTACGATAACCCAAAGCTCTTTTGCTATCTCAGTGTGGAAAGATACAAAATGGTGGCAAAATGAAGTAACCCCGGCGAGTTTCTGTGAATTGTATGGGGCTTGTGGACCTTATGCTAGTTGCACACTTGCATATGCACCAGCTTGCCAATGTTTACGTGGGTTCATTCCAAAGTCACCGCAGAGATGGGCAATATTCGACTGGAGTCAAGGGTGTGTCCGTAATATATCGTTAAGTTGCAACACCCCACATGTGGATGTGGATGATGAGTTCATCAAATATATGGGTCTCAAAGTACCAGATACTACACATACTTTGTTGTATGAGAATATTGATGATTTAGGGTTATGCAGAACCATGTGCTTGAATAATTGTTCTTGTACAGCTTTCACTAATTCAGACATAAGTGGAAAGGGTAGTGGCTGTGTCATGTGGTTTGGTGATCTAATCGACATAAGACAGTTTGACTCTGGTGGCCAAAATCTCTACATCCGTTTAGCTCGGGAAATAATAGAAGAGACTTCAAATGGGCGCAACAAGACAACGACTTCAAATGGGCGTAACAAGACAACGACTTCAAATGGGCGCAACAAGACAACCATAGCTGCTACCACTGCTGCTGTAATTTCTGGGATGCTTTTATTTTGCATATATGTGATATATAGAGTCCGAAGGAGAATTTCTGATAAGTCAAAGGCTGAAGATAACATTGAAAAGCATCTAGAGGATATGGATTTGCCATTATTCAATCTGCAAACAATATCTAGTGCCACTAACAACTTCTCACTGAATAATAAGATCGGACAAGGTGGTTTTGGATCCGTATACAAGGGAAAATTAGCAGATGGGCAAGAAATTGCTGTTAAGAGACTTTCAAGTAACTCTGGACAAGGAATTACCGAGTTCCTAACAGAAGTAAAACTGATTGCAAAACTTCAACACCGAAATCTGGTTAAGCTTCTTGGCTGTTGTGTTGGAGGACAAGAAAAATTGCTAGTGTATGAATACATGGTCAATGGTAGCCTTGACTCCTTTATTTTTGATAAAATAAATGGTAAATTATTGGAGTGGCCCCAACGCTTCCATATAATATTTGGAATTGCTAGGGGACTTGTGTATCTTCATCAAGATTCTCGATTAAGAATTATTCATAGAGATCTCAAAGCAAGTAACGTATTGTTGGATGACAAGTTGAATCCAAAAATATCAGATTTTGGAATGGCCAGATCTTTTGGAGGAGACCAGATTGAAGGAAATACAAATAGAGTAGTTGGAACATACGGATACATGGCTCCAGAGTATGCTGTTGATGGGCAATTTTCAATCAAATCAGACGTTTTCAGCTTTGGTGTTTTACTATTGGAGATTATATGCGGGAACAAAAATAGAGCACTTTGTCATGGAAATGAGACGCTTAATCTTGTTGGTTATGCATGGGCACTTTGGAGAGAGGGAAAAGCATTGGAGTTGATTGAGTCAAGAATAAAGGAATCATGTGTAGTGTCAGAGGCATTGCAATGCATCCATGTGAGTCTGTTGTGTGTGCAACAATACCCAGAGGATAGGCCTACAATGACATCTGTGGTTCAAATGCTAGGTAGTGAAATGGAACTGGTTGAACCTAAAGAACCTGGTTTCTTTCCAAGGAAAGTTTCTGATGAACCAAATCAAAATGAAATTAGTTCAAATGAAGAATTAACCATTACATCGTTAAATGGACGATGA 2517 0.3957 MDILFFMIMSMVISYIIVPSILASNSISASESLTDGKTLVSKGGQFELVFFSPGNSTRRYLGIWYKQIPIQKVVWVANRVNPINNTLGILTLTTSGNLMLRQNDSLVWSTTSAKQAKKPMAELLDSGNLVIRNQEETDPEGGYLWQSFDYPCDTILPGMKLGWDLRNDLERRITSWKSPDDPSPGDLSWGLVLHNYPEFYLMNGAVKYCRMGPWNGLQFSGLSDRKQSSVYDLKYVANNDLNYVSNKDEMFYSFTLKNSSALVTITITQSSFAISVWKDTKWWQNEVTPASFCELYGACGPYASCTLAYAPACQCLRGFIPKSPQRWAIFDWSQGCVRNISLSCNTPHVDVDDEFIKYMGLKVPDTTHTLLYENIDDLGLCRTMCLNNCSCTAFTNSDISGKGSGCVMWFGDLIDIRQFDSGGQNLYIRLAREIIEETSNGRNKTTTSNGRNKTTTSNGRNKTTIAATTAAVISGMLLFCIYVIYRVRRRISDKSKAEDNIEKHLEDMDLPLFNLQTISSATNNFSLNNKIGQGGFGSVYKGKLADGQEIAVKRLSSNSGQGITEFLTEVKLIAKLQHRNLVKLLGCCVGGQEKLLVYEYMVNGSLDSFIFDKINGKLLEWPQRFHIIFGIARGLVYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGMARSFGGDQIEGNTNRVVGTYGYMAPEYAVDGQFSIKSDVFSFGVLLLEIICGNKNRALCHGNETLNLVGYAWALWREGKALELIESRIKESCVVSEALQCIHVSLLCVQQYPEDRPTMTSVVQMLGSEMELVEPKEPGFFPRKVSDEPNQNEISSNEELTITSLNGR* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2615 838 PIRSF SRK 1 838 IPR024171 GO:0004674
Mtr4g2615 838 ProSiteProfiles Protein kinase domain profile. 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2615 838 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 34 837 - -
Mtr4g2615 838 MobiDBLite consensus disorder prediction 439 460 - -
Mtr4g2615 838 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Mtr4g2615 838 SUPERFAMILY Protein kinase-like (PK-like) 510 817 IPR011009 -
Mtr4g2615 838 MobiDBLite consensus disorder prediction 818 838 - -
Mtr4g2615 838 CDD PAN_AP_plant 342 431 - -
Mtr4g2615 838 Gene3D Phosphorylase Kinase; domain 1 485 600 - -
Mtr4g2615 838 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Mtr4g2615 838 MobiDBLite consensus disorder prediction 440 460 - -
Mtr4g2615 838 SMART blect_4 30 151 IPR001480 -
Mtr4g2615 838 CDD STKc_IRAK 531 796 - -
Mtr4g2615 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Mtr4g2615 838 Pfam S-locus glycoprotein domain 210 323 IPR000858 GO:0048544
Mtr4g2615 838 SMART ntp_6 350 430 IPR003609 -
Mtr4g2615 838 Gene3D Transferase(Phosphotransferase) domain 1 601 806 - -
Mtr4g2615 838 Gene3D - 20 148 IPR036426 -
Mtr4g2615 838 Pfam Protein tyrosine and serine/threonine kinase 526 796 IPR001245 GO:0004672|GO:0006468
Mtr4g2615 838 ProSiteProfiles PAN/Apple domain profile. 344 431 IPR003609 -
Mtr4g2615 838 CDD B_lectin 30 151 IPR001480 -
Mtr4g2615 838 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 34 837 - -
Mtr4g2615 838 SMART serkin_6 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2615 838 MobiDBLite consensus disorder prediction 812 838 - -
Mtr4g2615 838 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Mtr4g2615 838 Pfam D-mannose binding lectin 73 177 IPR001480 -
Mtr4g2615 838 Pfam PAN-like domain 351 416 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2615 Mtr-Chr4 39651542 39655670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2615 461 810 Receptor kinase-like Gene Family AT4G23230 52.707 1.05e-121 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g2615 PK_Tyr_Ser-Thr 1.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2615 - - gmx:100812007 1121.3