Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2607 ATGGCTGCTTTGACGATGAGAGCTGCTGCAGCGGTGGCAGTGCCCCGCAGTTTCTGCCGACTCTTTTGCACTAATCCAATTGCTTCTTCTCCAGCTTTCCCTTCTTTCTCTTCATCGCCGCCTTCCGCTCGACAGATGGCCGAGCCTAGCACCAACCTCTTCGTCTCTGGGCTTAGCAAACGTACTACAACAGAGACACTGAGGGAAGCATTTCAAAAGTTCGGCGAAGTTGTTCATGCAAGGGTGGTAACAGATCGAGTCTCAGGTTACTCCAAGGGATTTGGTTTTGTGAAATATGCTACTTTAGAAGATGCTGCTAAGGGCATTGAAGGCATGGATGGCAAGTTTTTGGAGGGCTGGGTTATATTTGCAGAGTATGCAAGACCAAGACCACCACCCGGTGAAGCTGTAAATAATACGGGCCGACCTTATTAA 435 0.492 MAALTMRAAAAVAVPRSFCRLFCTNPIASSPAFPSFSSSPPSARQMAEPSTNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLEGWVIFAEYARPRPPPGEAVNNTGRPY* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2607 144 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 5 141 - -
Mtr4g2607 144 SMART rrm1_1 52 125 IPR000504 GO:0003723
Mtr4g2607 144 Gene3D - 29 137 IPR012677 -
Mtr4g2607 144 PANTHER TRANSFORMER-2-RELATED 5 141 - -
Mtr4g2607 144 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 53 119 IPR000504 GO:0003723
Mtr4g2607 144 SUPERFAMILY RNA-binding domain, RBD 34 139 IPR035979 GO:0003676
Mtr4g2607 144 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 51 129 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2607 Mtr-Chr4 39582848 39585813 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2607 50 131 Eukaryotic Initiation Factors Gene Family AT4G34110 34.146 2.23e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2607 - - gmx:100789351 191.045