Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2600 ATGGGAATTGAGAGATATATGGTTGTCATAAAGTTTAGTTTTTGCGTTCTTTTAGTTCTGCAACTTGTAGCAGCAGTTAGCTCTATAGAAAAGAAGGAAACACAAGATGGTTTGGTTAGAGAACTATTTGATTCAGCATCTGGATTGTTGGATGAGCACACGGCAAAGGTATTTAGGACCACTTGCTGTGAAGATTTTATTCATTTAAAGAAAGAGGTTGAATATCATGATTTATGCCTCCCACTGGAATTGTTTGCAAGCACCAATAAAGTCAGCTCCACGGTTCGACCATTTGCTCAAACAGATATCCAAAAATTGCTTAATGCTTGTCATCCTCAAATCAAGGAAATCTTTCTTCATTATTTGAGAAAAAATAATCTTCTATTACATGTCTTAGGCGAAGAGGATGATTCCAAGATATGGCATGTCACTAATACAGGATATCTTTTTTCCACATCCAGTATTCCTAGAAGAAATCCAGGCCGTGTTTTGCTCCAGCACATATCAGAACCACCTAGTTTAGGCCCCACAGTTGGATCACCTACCCCGAGTCTCACACCATCACCTGAACCCAGTCTCCCTCCATCGCCTGAACCCAGCCTATCCCCATCACCCGCTCCAGCGCCTCTACCTCCTAAACCTCTTTCTCCTCCTTTGTCACCAGCCTCATTTTTCCCAAAACTGACACCGCCAGCAGCTGCAGACATTTCTGCTCCTCCATCTTCTGACACAAGCGGGAAGGAAGATAACCATAGTAATAAAACAACAGTTGTTCTTTCTGTAGTTATAACTATATCGGTGATATTTATAGCTGCAGCATTGTTCTTTTTATGCTTTCGTAAGGCTGGCCGGCGTAGACAAAATGATGAGAGGCCTCTGCTCAGCTTGAGCATGAATGACTATTCTTTTGGTCCTTCCAATCATGCTTTTGGAAATACGACAAAAGGGGAGAAGCTTGGATTTCAGTCATCAAGTAATAATTTAGGAGACAACAAGAAGACCTCACTGCAAGGAAATCAATCGATGGGAGCTTTTGCTGTTGTCGGATCGCCATTTGAATTGAATCCTCCTCCTGGGAGAGTGGGAACTATCCATTCTGGAATGCCACCTTTAAGACCTCCTCCAGGCAGGATGAATCCTCTTCCCCATGAGCCACCTTCGTTCACACCTTTTGGTAATACTGCCGTCTCTGCTGCTGCGCCTCCTCCTCCTCGACAGTCTGGTGTTGCTAGTGCTCGACCTCCTGCTACTCCTTCACCACCACAATCATTACTAGCTGGTGCCAAACCTGTTCCTCCTCGCCCTCCACTACACCCTGCTCTACCTGGTGCCAAACCTAGTCCTCCACCACCCCCTGCACCACTTGGTGCCAAACCCGGTCCTCCTCCCCCACCACCCCCTGCACCACCTAGTGCCAAACCCGGTCCTCCCCCCCCACCACCACCAGCACCATCTGGTGCTAAACCTGGTCCTCGTCCACCTCCTCCTCCTCCTAAGAGTGGCGTAGCTCCTCCTCGTCCTCCAATTGGCCCAAAGGCTGGTGGACCAAAAGCTACAGAGAATGCTGAAGCAGGTGCAGAAGGTGGAGCTGATACTTCTAAAGCCAAACTAAAGCCATTTTTCTGGGATAAGGTTCCAGCTAATTCAGATCAATCAATGGTTTGGAATCAGATCAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGACACTTTTTGGTTATAATGCTGTGAATAAGAACAATGGTCAACGGCAGAAGGAGTCTTCCTCCTCCCAAGACCCTTCACCTCAATATATCCAGATCGTCGACAAAAAGAAAGCACAAAATTTATTAATTCTGTTGCGCGCATTGAACGTGACGATGGAAGAAGTTTGTGATGCACTTTATGAAGGAAATGAGCTACCGTCGGAATTCCTTCAAACCTTGTTGAAGATGGCACCGACATCAGATGAAGAACTTAAGCTTAGACTTTTTAATGGTGATCTGTCTCAACTTGGGCCTGCTGACCGTTTCCTGAAAGCCATGGTGGACATTCCCTCTGCGTTTAAGCGAATGGAAGTACTGCTTTTTATGTGTACATTTAAAGAGGAGCTCACTACTACTATGGAGTCTTTTGCAGTTTTAGAGGTTGCTTGTAAGGAACTAAGAAACAGCCGGCTGTTCCACAAACTTCTTGAAGCTGTTCTCAAAACTGGTAACCGTATGAACGACGGAACATACCGTGGCGGTGCACAAGCATTTAAACTTGATACACTCTTGAAATTATCTGATGTTAAAGGAACAGACGGCAAGACTACACTTTTACACTTTGTTGTTCAAGAGATTATCCGCTCTGAGGGCATAAAAGCTGCTCGAGCGGCGAAAGATAGCCAGAGTTTGTCTAATATTAAAACGGACGAGCTTCATGAAACAGAAGACCACTATCGCGAGCTTGGTCTTGAGATGGTTTCACACTTGAGCACTGAGCTTGAGAATGTTAAAAGAGGATCTGTTCTAGATGCCGACAGCTTAACAGCAACCACTATCAAACTTGGCCACGGTCTTGTGAAAGCCAAAGATATACTAAACAAAAACCTGAAGAATGTGGAGGACGATAGAGGGTTTCGTGAGACAGTGGAAAGTTTTGTCAAGAACGCTGAGGCTGATGTTAAGAAACTGCTTGAAGATGAGAAGAAAATCATGGCTCTGGTGAAGAGCACGGGCGATTATTTTCACGGGAATGCTACGAAGGATGATGGCTTGCGATTGTTTGTAGTAGTAAGAGACTTCTTAATAATGCTGGATAAAGTATGTAAGGAGGTGAGAGATGCACAAAAGAAGCCAGCAAAACCTATAAAACAAGAAACTTCACGAGGACTGTCTTCGTCCGATACACGTCCATCACCTTCTGATTTTCGTCAGCGGCTTTTTCCAGCTATAGCTGAAAGGAGGATAGATGACGATAGTTCAGATGAAGAGAGTCCATAG 2973 0.4477 MGIERYMVVIKFSFCVLLVLQLVAAVSSIEKKETQDGLVRELFDSASGLLDEHTAKVFRTTCCEDFIHLKKEVEYHDLCLPLELFASTNKVSSTVRPFAQTDIQKLLNACHPQIKEIFLHYLRKNNLLLHVLGEEDDSKIWHVTNTGYLFSTSSIPRRNPGRVLLQHISEPPSLGPTVGSPTPSLTPSPEPSLPPSPEPSLSPSPAPAPLPPKPLSPPLSPASFFPKLTPPAAADISAPPSSDTSGKEDNHSNKTTVVLSVVITISVIFIAAALFFLCFRKAGRRRQNDERPLLSLSMNDYSFGPSNHAFGNTTKGEKLGFQSSSNNLGDNKKTSLQGNQSMGAFAVVGSPFELNPPPGRVGTIHSGMPPLRPPPGRMNPLPHEPPSFTPFGNTAVSAAAPPPPRQSGVASARPPATPSPPQSLLAGAKPVPPRPPLHPALPGAKPSPPPPPAPLGAKPGPPPPPPPAPPSAKPGPPPPPPPAPSGAKPGPRPPPPPPKSGVAPPRPPIGPKAGGPKATENAEAGAEGGADTSKAKLKPFFWDKVPANSDQSMVWNQIKSGSFQFNEEMIETLFGYNAVNKNNGQRQKESSSSQDPSPQYIQIVDKKKAQNLLILLRALNVTMEEVCDALYEGNELPSEFLQTLLKMAPTSDEELKLRLFNGDLSQLGPADRFLKAMVDIPSAFKRMEVLLFMCTFKEELTTTMESFAVLEVACKELRNSRLFHKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIKAARAAKDSQSLSNIKTDELHETEDHYRELGLEMVSHLSTELENVKRGSVLDADSLTATTIKLGHGLVKAKDILNKNLKNVEDDRGFRETVESFVKNAEADVKKLLEDEKKIMALVKSTGDYFHGNATKDDGLRLFVVVRDFLIMLDKVCKEVRDAQKKPAKPIKQETSRGLSSSDTRPSPSDFRQRLFPAIAERRIDDDSSDEESP* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2600 990 MobiDBLite consensus disorder prediction 972 990 - -
Mtr4g2600 990 Coils Coil 878 898 - -
Mtr4g2600 990 PANTHER FORMIN-LIKE PROTEIN 1 988 - -
Mtr4g2600 990 MobiDBLite consensus disorder prediction 238 252 - -
Mtr4g2600 990 SUPERFAMILY Formin homology 2 domain (FH2 domain) 598 952 - -
Mtr4g2600 990 PANTHER FORMIN-RELATED 1 988 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mtr4g2600 990 MobiDBLite consensus disorder prediction 414 512 - -
Mtr4g2600 990 MobiDBLite consensus disorder prediction 167 252 - -
Mtr4g2600 990 Gene3D Formin, FH2 domain 533 958 IPR042201 -
Mtr4g2600 990 MobiDBLite consensus disorder prediction 176 225 - -
Mtr4g2600 990 MobiDBLite consensus disorder prediction 938 990 - -
Mtr4g2600 990 MobiDBLite consensus disorder prediction 308 337 - -
Mtr4g2600 990 Pfam Formin Homology 2 Domain 531 929 IPR015425 -
Mtr4g2600 990 MobiDBLite consensus disorder prediction 950 965 - -
Mtr4g2600 990 MobiDBLite consensus disorder prediction 360 531 - -
Mtr4g2600 990 MobiDBLite consensus disorder prediction 368 387 - -
Mtr4g2600 990 ProSiteProfiles Formin homology-2 (FH2) domain profile. 527 955 IPR015425 -
Mtr4g2600 990 SMART it6_source 527 944 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2600 Mtr-Chr4 39518098 39524451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2600 505 981 FH2 protein (formin) Gene Family AT5G54650 63.918 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2600 - - gmx:100793413 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2744 2 40725790 40731789 Mtr4g2600 4 39518098 39524451 PCT