Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2595 ATGGCTTGCACTAATAAAAGTATCATTCAAAGTAGCAATATGGTGAGTGATCAGAGCAGAAAATCATCATATGACGTGTTTATCAGCTTCAGAGGAGCAGACACACGATTCAACTTCACTGATCATCTTTTTTCCGCCCTCCAAATAAGAGGCATTGTTGCATTTAGAGATGACACTAAGCTTAAGAAAGGTGAATCTATAGCACCTGAACTCCTTCGTGCTATCGAAGCCTCTCGGACTTTCATTGTTGTCTTCTCAAACAACTATGCTTCCTCAACTTGGTGCTTGCGGGAATTGCAATACATCCTTCATTGCGTACAACTTTCTGGAAAACGTGTTCTCCCTGTTTTCTATGATGTTGATCCTTCCGAGGTGCGAAAGCAAAGTGGGAGTTATAAAAAAGCATTTGCCCAACATGAGGAAAGATTCAAACAAGACACTGAGGTCCTGCAAGGATGGAGGACAGCTCTCACGCAAGTCGCCAATCTTTCAGGTTGGGATATACGTGATAAGCCCCAGTCAGCAGAGATTAAAAAGATTGTTGAAGAGATAGTAAATATATTGAATTGCAAATTTTCAAGCCTTCCAAATGATTTAGTTGGGACGCATTCTCTCATAGAAAGATTGGAAAAGCTTTTACTTTTGGATGTGGTTGATGATGTTAGGATTGTTGGAATTTCTGGGATGGGTGGAGTAGGGAAGACAACTCTTGCTAGGATTTTATATAGAAGAATCTCTTCTCGGTTTGATGCATGTTGCTTTATTGATGATCTAAGCAAAATTTGCAAACATGCTGGTCCAGTTGCTGCACAAAAGCAAATTCTAAGCCAAACTTTAGGCGAAGAACACCTTCAGATATGCAATCTAAGTGACGGAGCTAATTTGATACAAAATAGGCTTGGTCATCTGAGGGCCTTCATAATTCTTGATAATGTTGATCAAGGAGAACAATTGGAGAAATTGGCTTTGAACCGTAAGCTGTTAGGTGTTGGGAGTAGAATCATTATAATTTCGAGAGATACTCATATCTTGAATAGGTATGGAGTGGATGTAGTTTTCAAAGTTCCACTCTTGAATCAAACTAATTCTCTTCAATTATTTTGCCAACAAGCTTTCAAACGTGATAATATTTTGAGTAATTATGACGAGTTGGTATATGAGATACTAAATTATGCTAATGGCTTACCACTAGCGATTAAAGCATTGGGCTCATTTTTGTTTGGTCGAGATATTTATGAATGGAGAAGTGCATTGACTAGATTGAGAGACAATCCAAACAAAGATATCTTCGATGTATTGCGATTGAGTTTTGATGGGCTAGAGAACATGGAAAAAGAAATATTTCTCGATATTGCATGTTTTTTCAATGGACGTAAGGAAGCACTTGTTAAAAATGTACTGAATTGTTGTGGATTTCATGCTGATATTGGATTAAGAGTTCTCATTGACAAATCACTTATAAGCATATCAGAAAAAAGTAAGATTGAAATGCATGGTTTGTTAGAAGAGCTGGGCAAAAAAATTGTTCAAGAAAATTCAAGCAAAGATTCAAGAAAGTGGACAAGGTTGTGGCTCCATGAATATTTCAACAATGTTATGTCAGAGAATAAGGAAAAGAATGTTGAAGCCATAGTTTTGAGGCGTGGACGGCAAAGAGAAACAAAAATAGTTATAGCCGAAGCATTGTCAAAGATGAGTCATCTTAGAATGCTTATACTTGATGGAATGGACTTCTCAGGAAGCTTGGATTGTATTTCTAATGAATTAAGATATGTTGAGTGGCGGGAATATCCTTTCATGTATTTGCCATCAAGTTTTCAACCCTACCAACTTGTTGAGTTGATCTTGGAAGATAGCAGCATCAAACAACTATGGGAAGGCACGAAGTACTTGCCAAATTTGAGAACTCTTGAATTGAGGAACTCCAAAAGTCTAATAAAAGTGCCAGATTTCGGAGAGATCCCTAATCTTGAGCGGCTAAATCTCAAAGGATGTGTAAAACTTGAGCAGATAGATCCATCTATTAGTGTTCTAAGAAAACTTGTTTACTTGAATTTGGAAGATTGCAAAAATCTAGTAACCATACCGAATGACTTGTTTGGTCTCACCTCTCTTGAGTATCTAAATCTTTCTGGATGTTACAAGGCATTTAACACTTCATTGCATTTGAAGAATTATATTGATTCAAGTGAAAGTGCGTCACATTCCCAATCAAAATTTTCCATATTTGACTGGATCACTTTGCCTCTCCAATCTATGTTTCCAAAAGAAAACCTGGACATGGGTTTAGCAATACCTAGTTGTTTGTTGCCTTCATTGCCAAGCTTATCCTGTTTGCGTAAACTTGATATTAGTTATTGCAGTTTAAGCCAAATCCCTGATGCTATTGGTTGCCTACTTTGGTTAGAAAGATTAAATTTAGGGGGAAACAATTTTGTGACATTGCCTAGTTTCAGAGAACTTTCAAAACTTGCATATTTGAATTTAGAGAACTGTATGCAGTTGAAATATTTTCCTGAGCTTCCTTCAGCTTCCTCCATCGAACACGAGCACAGTCATATGTTTTCAGATACTAGTTATTGGAGGAGAGCAGGATTGTGTATTTTCAACTGTCCTGAATTGGGTGAGATGGAAAAGTGCAGTGACTTGGCATTTTCATGGATGATACAATTTTTGCAGGCAAACCAATTAGAATCCTCCTCTGTCTTCTTCCGCGAAATCAATATTGTTATACCTGGAACAGAAATGCCAAGGTGGTTCAACAATCAGAACATGGAAAGTTCAATAAGTATAGACATATCTCCTATCATGCATCATGACAGTGATGTCATTGCTTTTGCGTGTTGTGTAGTATTTTCTGCAGCGCCTTATCCATCTACGAATATGAAAACCAATTACCGAAAGCCTGTAATACATTTGTGTTTTAGTAGCGGTGACTTGGAGGTATTTCTAGGCATTCCAGCACATACAAATTTAAATATGCTGAAATCAAATCACATTTGGCTAGCTTATTTCACTCGAGAATCATTCATTGATCTTATGAGTGATATAGACAGTACACTTGGTGATATTAGAATGGAAGTTTTGATTGTGGATGGTGAAGGTTTGGATGTAGAGGTGAAGAATTGTGGTTATCGTTGGGTATATAAACATGATCTACAACATCTCAACTTTACAATGATGCATTGCAAAAGTTCATTAGCTCAGAACTGCGACATTTTGGGAATCGAAGATGAGGCACAACCAGAAGTGAAACCACGTTGTTACTCTATGAATCATTTTGTGCTTTGA 3291 0.3728 MACTNKSIIQSSNMVSDQSRKSSYDVFISFRGADTRFNFTDHLFSALQIRGIVAFRDDTKLKKGESIAPELLRAIEASRTFIVVFSNNYASSTWCLRELQYILHCVQLSGKRVLPVFYDVDPSEVRKQSGSYKKAFAQHEERFKQDTEVLQGWRTALTQVANLSGWDIRDKPQSAEIKKIVEEIVNILNCKFSSLPNDLVGTHSLIERLEKLLLLDVVDDVRIVGISGMGGVGKTTLARILYRRISSRFDACCFIDDLSKICKHAGPVAAQKQILSQTLGEEHLQICNLSDGANLIQNRLGHLRAFIILDNVDQGEQLEKLALNRKLLGVGSRIIIISRDTHILNRYGVDVVFKVPLLNQTNSLQLFCQQAFKRDNILSNYDELVYEILNYANGLPLAIKALGSFLFGRDIYEWRSALTRLRDNPNKDIFDVLRLSFDGLENMEKEIFLDIACFFNGRKEALVKNVLNCCGFHADIGLRVLIDKSLISISEKSKIEMHGLLEELGKKIVQENSSKDSRKWTRLWLHEYFNNVMSENKEKNVEAIVLRRGRQRETKIVIAEALSKMSHLRMLILDGMDFSGSLDCISNELRYVEWREYPFMYLPSSFQPYQLVELILEDSSIKQLWEGTKYLPNLRTLELRNSKSLIKVPDFGEIPNLERLNLKGCVKLEQIDPSISVLRKLVYLNLEDCKNLVTIPNDLFGLTSLEYLNLSGCYKAFNTSLHLKNYIDSSESASHSQSKFSIFDWITLPLQSMFPKENLDMGLAIPSCLLPSLPSLSCLRKLDISYCSLSQIPDAIGCLLWLERLNLGGNNFVTLPSFRELSKLAYLNLENCMQLKYFPELPSASSIEHEHSHMFSDTSYWRRAGLCIFNCPELGEMEKCSDLAFSWMIQFLQANQLESSSVFFREINIVIPGTEMPRWFNNQNMESSISIDISPIMHHDSDVIAFACCVVFSAAPYPSTNMKTNYRKPVIHLCFSSGDLEVFLGIPAHTNLNMLKSNHIWLAYFTRESFIDLMSDIDSTLGDIRMEVLIVDGEGLDVEVKNCGYRWVYKHDLQHLNFTMMHCKSSLAQNCDILGIEDEAQPEVKPRCYSMNHFVL* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2595 1096 Gene3D - 17 189 IPR035897 -
Mtr4g2595 1096 Pfam NB-ARC domain 208 425 IPR002182 GO:0043531
Mtr4g2595 1096 Pfam Leucine Rich Repeat 610 629 IPR011713 -
Mtr4g2595 1096 Gene3D - 190 352 IPR027417 -
Mtr4g2595 1096 SUPERFAMILY L domain-like 557 846 - -
Mtr4g2595 1096 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Mtr4g2595 1096 Pfam TIR domain 24 191 IPR000157 GO:0007165
Mtr4g2595 1096 Pfam C-JID domain 911 1053 IPR045344 -
Mtr4g2595 1096 Gene3D - 357 441 IPR042197 -
Mtr4g2595 1096 SUPERFAMILY "Winged helix" DNA-binding domain 428 531 IPR036390 -
Mtr4g2595 1096 Gene3D Ribonuclease Inhibitor 746 899 IPR032675 -
Mtr4g2595 1096 Gene3D Ribonuclease Inhibitor 492 740 IPR032675 -
Mtr4g2595 1096 SMART till_3 23 163 IPR000157 GO:0007165
Mtr4g2595 1096 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 194 1064 - -
Mtr4g2595 1096 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 194 1064 IPR044974 GO:0006952
Mtr4g2595 1096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 451 IPR027417 -
Mtr4g2595 1096 PRINTS Disease resistance protein signature 223 238 - -
Mtr4g2595 1096 PRINTS Disease resistance protein signature 299 313 - -
Mtr4g2595 1096 PRINTS Disease resistance protein signature 392 406 - -
Mtr4g2595 1096 PRINTS Disease resistance protein signature 629 645 - -
Mtr4g2595 1096 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 166 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2595 Mtr-Chr4 39481884 39486992 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2595 19 817 WRKY Transcription Factor Family AT4G12020 29.854 1.61e-81 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2595 - - mtr:MTR_4g080070 1205.66