Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2592 ATGACATCGTCGTTAAAGAATAATTATTATGACGTGTTTGTCACCTTCAGAGGTGAAGATACTCGCTTCAACTTTACTGATCATCTTTTTGCTGCCCTTCAAAGAAAAGGCATTTTTGCGTTTAGAGATGACACTAAGCTTCAAAAAGGTGAATCGATAGCACCCGAGCTCATTCGTGCAATTGAAGGGTCTCAGGTTTTCATTGCGGTCCTCTCCAAAAACTATGCTTCCTCAACTTGGTGCTTGCGAGAATTGGAATACATCCTTCACTACAGTCAAGTTTTTGGAAGACGTGTTCTTCCTGTTTTTTATGATGTTGATCCTTCTGAGGTGAGACATCAAAAAGGAATTTACGGTGAAGCCTTTTCCAAACATGAACAAACATTCCAACATGACTCTCATGTGGTACAAAGATGGAGGGAAGCTCTGACACAAGTGGGGAATATCTCAGGCTGGGATCTTCGTGATAAGCCTCAATATGAAGAGATTAAAAAGATTGTTGACGAGATATTGAATATATTGGGTCACAATTATTCATCTCTTCCAAAAGAACTAGTTGGTATGAATTCTCATATAGATAAAGTAGCAAATCTATTACTTTTGGACTCCATTGATGATGTTCGGGTTGTAGGAATTTGTGGGATGGGTGGAATAGGGAAGACAACTCTGGCTACTGCTTTATATGGTCAAATCTCTCATCAATTTGATGCACGTTGTTTTATTGATGATCTAAGCAAAATATATAGACATGATGGTCAAGTTGGTGCACAAAAGCAAATCCTACACCAGACTCTTGGCGTGGAACCCTTTCAGCTTTGCAATCTATATCACACAACTGATTTGATGCGAAGGAGGCTACGTCGCCTACGAGTACTTATAATTGTTGATAATGTTGATAAAGTTGGACAACTTGATAAATTGGGTGTGAATCGTGAATGGTTAGGTGCAGGGAGTAGAATCATTATAATTTCTGGAGATGAACATATCTTGAAAGAGTATGGAGTTGATGTAGTTTACAGAGTTCCACTCTTGAATTGGACCAACTCTCTTCAATTATTTTCTCTAAAAGCTTTCAAACTTTATCATATTATCAGTGATTATGAGGAGTTGACATATGACATATTAAATTATGCTAATGGCTTACCACTAGCGATTACAGTGTTGGGTTCTAGTTTGTTCAGTCGAAGTATCTCTGAATGGAGATCTGAATTGACTAAATTGAAAGTAAGTCCACATAAAGATATTATGGATGTGCTGCAGTTGAGTTTAATTGGGCTAATGGAGATGGAAAAAGAAATATTTCTTCATATTGCATGTTTCTTCAACGGGCGAGAGGAGGACTATGTTAAAAATGTTCTGAACTATTGTGGATTTCATGCTGATATAGGATTAAGAGTTCTTGTTGATAACTCACTCATACACATTTCAGATGAAAGTAAGATTGAAATGCATGGTTTGTTCGAAGTGCTAGGCAAAAATATTGTTCATGAAATTTCAAGAAAGTGGAGCAGGTTGTGGCTGCATGAACAATTCTACAATGTCGTGTCAAATAATATGGAAATTAACGTTGAAGCGGTAGTTTTGTACGGTCCTGGGAACGAAAAGGGAATATTGATGGCTGAAGCATTGTCAAAAATGAACAGTCTTGAATTGCTCATTCTCAAGAATGTTAAAGTTTCGGGAAGCCTAAATTATCTTTCTAATAAATTAAGATATCTTGAATGGGAAGCCGAAAAGGGAATATTGATGGCTGAAGCATTGTCAAAAATGAACAGTCTTGAATTGCTCATTCTCAAAAAAGTGAAAGTTTCGGGAAGCCTAAATTATCTTTCTAATAAATTAAGATATCTTGAATGGGATGAATATCCTTTCTTGTATTTACCATCAAGTTCTCAGCTTGATGAACTTTCCGAATTGATCTTAGTAGGTAGCAGCATCACACAACTATGGAAAGACAAGAAGTATCTGCCCAATTTGAGGAATCTGGATCTAAGCTGCTCTAAAAATCTAGCCACGATGCCACATTTTGCAGAGTTCCCAAATCTTAAGCGGCTAAATCTTGAAGGATGTGTAAGCCTTGTGCAGATTAATTCATCTATTGGCCTTCTAAGAGAGCTTGTTTTCTTGAATTTGAAGAATTGTAAAAATCTTATATGCATACCCAATGAAATATCTGGTCTCACCTCTCTTAAATATTTTACTATTTGCGGCTGTTCCAACACGTTTAAAAACTCCAAAGCACATGGATATTTTTCTAGCTGTTTGTTGCCTTCCTTGCCTAGCGTGTCTTGTTTAAGTGAAATTGATATCAGTTTTTGCAACCTAAGTCAAATCCCTGATGCTCTTGGAAGTCTAACTTGGTTAGAAAGACTAAATTTAAGGGGAAACAATTTTGTCACATTGCCTAGCCTCCGGGATCATTCTAGACTTGAATACTTAAATTTGGAGCATTGCAAGCAGTTGACATCTTTACCTGAGCTCCCTTTACCCGCTGCTATCAAGCAGGATAAACATAAGAGAGCAGGAATGTTTATATTCAACTGCCCTGAATTGGGTGAGAGGGAGCAGTGCATTAACATGACACTTTCATGGATGATTCATTTCATTCAAGGAAAGCAAGATTCCTCTGCCTCCTTTCATCAGATTGATATTGTTATTCCTGGAACTGAAATTCCAAAGTGGTTCAACAATCGGAGAATGGGTAGATCAATAAGCATAGACCCATCTCCCATTGTGTATGACGATAATATCATTGGCATTGCTTGCTGTGCCGTATTTTCTGTGGAACTTTTTGATCCAACTAAGACAAGATATGAATGGGGACCTATAATACGGTTAGGTTTTAAGAGCAGCAATGCTGCAAACAGCAATTATGTGGTCATTCCAGTAACTCTCTACAGGCATCTTATTACAGTCAAATCGAATCACATGTGGCTAATCTATTTTGATCGGGAATTGTTCTTCAGTTTTCTGAGATCTATAGACAATACACTGTGGGAACTTGATCATATCAAGATGGAAGCTTCCGTTATGAATGGCCAAGGCTTGCATCTGGAGGTAAAGAATTGCGGGTTTCGATGGGTATTTAAACAGGATCAACAACCATTTGACTCACCTAACAATGACGTGCCGGGGAAAGAGGAAAGTCATGAGTTCAGACCTGTTCTTTGGGCGATTGAAGATGAGGCACAGAACCGCAAACAGGATCAACAACCATTTGACTCACCTAACAATGACGTGCCGGGGAAAGAGGAAAGTCATAAGTTCAGACCTGCAATTCTTTGGGCGATTGAAGATGAGGCACAGAACCGCAAACACAAGTACAATAAGTCATCTGATTGA 3342 0.3818 MTSSLKNNYYDVFVTFRGEDTRFNFTDHLFAALQRKGIFAFRDDTKLQKGESIAPELIRAIEGSQVFIAVLSKNYASSTWCLRELEYILHYSQVFGRRVLPVFYDVDPSEVRHQKGIYGEAFSKHEQTFQHDSHVVQRWREALTQVGNISGWDLRDKPQYEEIKKIVDEILNILGHNYSSLPKELVGMNSHIDKVANLLLLDSIDDVRVVGICGMGGIGKTTLATALYGQISHQFDARCFIDDLSKIYRHDGQVGAQKQILHQTLGVEPFQLCNLYHTTDLMRRRLRRLRVLIIVDNVDKVGQLDKLGVNREWLGAGSRIIIISGDEHILKEYGVDVVYRVPLLNWTNSLQLFSLKAFKLYHIISDYEELTYDILNYANGLPLAITVLGSSLFSRSISEWRSELTKLKVSPHKDIMDVLQLSLIGLMEMEKEIFLHIACFFNGREEDYVKNVLNYCGFHADIGLRVLVDNSLIHISDESKIEMHGLFEVLGKNIVHEISRKWSRLWLHEQFYNVVSNNMEINVEAVVLYGPGNEKGILMAEALSKMNSLELLILKNVKVSGSLNYLSNKLRYLEWEAEKGILMAEALSKMNSLELLILKKVKVSGSLNYLSNKLRYLEWDEYPFLYLPSSSQLDELSELILVGSSITQLWKDKKYLPNLRNLDLSCSKNLATMPHFAEFPNLKRLNLEGCVSLVQINSSIGLLRELVFLNLKNCKNLICIPNEISGLTSLKYFTICGCSNTFKNSKAHGYFSSCLLPSLPSVSCLSEIDISFCNLSQIPDALGSLTWLERLNLRGNNFVTLPSLRDHSRLEYLNLEHCKQLTSLPELPLPAAIKQDKHKRAGMFIFNCPELGEREQCINMTLSWMIHFIQGKQDSSASFHQIDIVIPGTEIPKWFNNRRMGRSISIDPSPIVYDDNIIGIACCAVFSVELFDPTKTRYEWGPIIRLGFKSSNAANSNYVVIPVTLYRHLITVKSNHMWLIYFDRELFFSFLRSIDNTLWELDHIKMEASVMNGQGLHLEVKNCGFRWVFKQDQQPFDSPNNDVPGKEESHEFRPVLWAIEDEAQNRKQDQQPFDSPNNDVPGKEESHKFRPAILWAIEDEAQNRKHKYNKSSD* 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2592 1113 ProSiteProfiles TIR domain profile. 8 174 IPR000157 GO:0007165
Mtr4g2592 1113 SMART till_3 9 149 IPR000157 GO:0007165
Mtr4g2592 1113 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 152 IPR035897 -
Mtr4g2592 1113 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 767 1038 IPR044974 GO:0006952
Mtr4g2592 1113 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 183 576 IPR044974 GO:0006952
Mtr4g2592 1113 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 579 741 IPR044974 GO:0006952
Mtr4g2592 1113 Pfam NB-ARC domain 190 411 IPR002182 GO:0043531
Mtr4g2592 1113 MobiDBLite consensus disorder prediction 1064 1086 - -
Mtr4g2592 1113 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 183 576 - -
Mtr4g2592 1113 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 767 1038 - -
Mtr4g2592 1113 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 579 741 - -
Mtr4g2592 1113 SUPERFAMILY L domain-like 584 828 - -
Mtr4g2592 1113 Pfam C-JID domain 886 1033 IPR045344 -
Mtr4g2592 1113 SUPERFAMILY "Winged helix" DNA-binding domain 414 514 IPR036390 -
Mtr4g2592 1113 Gene3D - 7 174 IPR035897 -
Mtr4g2592 1113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 437 IPR027417 -
Mtr4g2592 1113 PRINTS Disease resistance protein signature 209 224 - -
Mtr4g2592 1113 PRINTS Disease resistance protein signature 285 299 - -
Mtr4g2592 1113 PRINTS Disease resistance protein signature 378 392 - -
Mtr4g2592 1113 PRINTS Disease resistance protein signature 654 670 - -
Mtr4g2592 1113 Pfam TIR domain 10 180 IPR000157 GO:0007165
Mtr4g2592 1113 Gene3D Ribonuclease Inhibitor 538 748 IPR032675 -
Mtr4g2592 1113 Gene3D Ribonuclease Inhibitor 749 862 IPR032675 -
Mtr4g2592 1113 Gene3D - 344 426 IPR042197 -
Mtr4g2592 1113 Gene3D - 175 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2592 Mtr-Chr4 39446056 39450293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2592 10 826 WRKY Transcription Factor Family AT4G12020 28.775 1.71e-74 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2592 - - mtr:MTR_4g081270 2226.82