Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2590 ATGGCTAGCAGCAACAACCCCTCTTCTTTAGCTCTGGTGACATTGCCAAAAAAGAAAAAGAACTTTTATGACGTGTTTGTGAGCTTCAGAGGTGAAGATACTCGCAACAATTTCACTGATTTCCTTTTTGATGCCCTCGAAGAAAAAGGTGTTTTTGCATTTAGGGATGACACTAATCTTCAAAAAGGTGAATCCATAGCACCTGAACTCTTTCATGCAATTGAAGGGTCTCAGGTTTTCGTTGTGGTCTTGTCAAAGAACTACGCTTTCTCAACTTGGTGCTTGAAAGAATTGGAATACATCCTGTGTTGTGTTCAAGCATCTAAAAAGTATGTTCTACCTGTGTTCTATGATGTTGATCCTTCTTTGGTGCGAAAGCAAACTGGGATTTATAGTGAAGCATTTGTCCAACATGGACACAGATTCAAACAAGACTCTCAAATGGTGCTACGATGGAGGGCAGCTCTGACACAAGTCGCCGATCTCTCTGGTTGGGATCTACGTGATAAGCGACAATCTCTAGAGATTAAAAAGATAGTTCAACGGATAATAACTATTTTGGACAGCAAATTATCTTCAAGTGCTTCAAACGATTTAGTTGGGATGGATTCTCCTAGACAAGAATTAGAAAAGCTTTTACTTTTGGACTCTGTTGATGATGTTCATGTTGTAGGAATTTGTGGGATGGGTGGAATAGGGAAGACAACCCTTGGCATGGTTCTATATGATAGAATTTCTCATCAATTTGGTGCATGCTGTTTTATTGATGATGTAAGCAAAATGTTTAGATTACATGATGGGCCACTCGATGTTCAAAAGCAAATTCTACATCAAACTCTCGGTGAAAATCACAATCAGATATGCAATCTTTCCACTGCATCTAACTTGATTAGACGTAGACTATGTCGTCAAAGGGTCCTTATGATTTTTGATAATGTTGATAAAGTTGAACAACTGGAAAAAATAGGTGTTTGTCGTGAATGGCTAGGTGAGGGAAGTAAAATCATTATAATTTCTAGAGATGAGCATATATTGAAGAATTATGGAGTAGATGAAGTTTACAAAGTTCCTCTCTTGGATTGGACTAACTCTCTTCAATTATTGTGTCGAAAAGCTTTCAAACTTGATCATATTTTGAATAGTTATGAAGGGTTGGTTAATGGCATACTACATTATGCCAATGGCCTACCACTTGCAATTAAAGTATTGGGTTCATTTTTGTTTGGTCGGGATATATCTGAATGGAGAAGTGCATTGGCTAGACTCAAAGAAAGTCCAGAGAAGGATGTTATGGATGTGTTGCGATTAAGTTTTGATGGGCTAAAGGAGCAGGAAAAAGAAATATTTCTTCATATTGCTTGTTTTTTCAATCAAGTTTGGGGGAAATATCTTAAAAATGTTTTAAATTGTTGTGGATTTCATGCCGATATTGGATTAAGAGTTCTCATTGATAAATCACTTATAAGCATTGATGCAGATGGATTTATTCACATGCATGGTTTGTTGGAAGAGCTAGGGAGAGAAATTGTTCAAGAAAATTCAAGCAAAGAGCAAAGAAACTGGAGGAGGATATGGTTCGTAAAACAAGTCAACGATGTCATGTTGGAGAAAATGGAAAAGAATGTTGAAGCCATAGTTTTGAATCATGAAAATGACGGTGAAGATGATGCAAAGATGGTTACGATAGTCGAACACTTGTCTAAAATGAGACATCTTAGATTGCTCATCGTCAGGTGTCCTGTGAACACCTCAGGAAACCTTAGTTGTTTTTCTAAAGAACTAAGATATGTTGAGTGGAGTGAATATCCTTTCAAGTATTTGCCATCGAGTTTTGACTCTAATCAACTTGTTGAATTGATCTTGGAGTATAGCAGCATAGAACAGTTATGGAAAGGCAAAAAGCATCTGCCTAAATTGAGAAATTTAAATCTAAGCCACTCCAAAAATTTAATAAAGATGCCACATTTTGGAGAGTTCCCGAATCTTGAGCGGCTAGATCTGGAAGGATGTATAAAACTTGTGCAGTTGGATCCATCTCTTAGTCTTTTAACGAAGCTTGTTTACTTGAATTTGAAAGATTGCAAATGTATAATAGGCTTACTCAGCAACAATCCAAGGCCTTTGAATATAAGAGCGTCACATTCCTCATCAACGACGCCCTCTAGCTTGAAACGGAACATGTTGCCTAAGCATTCCTCATTGCAGACTCCCACAACACACACAAATTTGTTTTCTTCCTTGCATAGCTTGTGCGAACTTAACCTTAGCTTTTGTAATCTACTTCAAATCCCCAATGCAATTGGATGTCTATATTGGTTAGAAGCATTAAATTTAGGGGGAAACAATTTTGTGACAGTACCTAGTCTGAGGGAGCTTTCAAAACTTGTATATTTAAGCTTAGAGCATTGCAAGCTGTTGAAATCTTTGCCTGTACTTCCTTCTCCTACTGCTATCGAGCACGATCTTTATAAAAACAATCTTCCTGCATTCGGAACTAGATGGCCTATAGGATTGTTCATTTTCAACTGTCCTAAATTGGGTGAAACGGAACGTTGGAGTAGCATGACATTTTCATGGATGATACAATTCATTCAGGCAAACCGACAATTCTCCCATGACTCCTCTGATAGGGTTCAAATTGTTACTCCAGGTAGTGAAATGCCAAGTTGGTTCAACAATCAGAGCAAGGGTAATTTAATACGAATAGATTCTTCTCCGATTATGCACGACAATAACAATAATATCGTTGGCTGTGTATGTTGTGTAGTATTTTCTATGACACCTCGGAGTCATCCAACAATGAGAAGGAGTTCTCCATCGAGACAGACCTATTTGGGACTGGAATTTACTGATACTCATGGCAGAGTGATTGAAAAAAGCAATACTGGTATTCAAGTAACTCTCAATGACAGACTTATTACGGCCAAATCAAATCACATCTGGCTAACCTATTTCCCTTTGGATTTGTCCTCGGATCTTTTGAATAGAACTCTCTGGGTTGATACCAGTAGATATGAAAATGATTTGAAAATAGAAGTGAAGAATTGTGGGTACCGTTGGGTTTATAAACAGGATCTACAAGAATTCAACTTAACAAAGATGAATCACAGAAATTCCTTAGGTGGAAAACTCAAGTCTTTGGCAATTGAAGGTGAGGCACAGTGA 3165 0.3763 MASSNNPSSLALVTLPKKKKNFYDVFVSFRGEDTRNNFTDFLFDALEEKGVFAFRDDTNLQKGESIAPELFHAIEGSQVFVVVLSKNYAFSTWCLKELEYILCCVQASKKYVLPVFYDVDPSLVRKQTGIYSEAFVQHGHRFKQDSQMVLRWRAALTQVADLSGWDLRDKRQSLEIKKIVQRIITILDSKLSSSASNDLVGMDSPRQELEKLLLLDSVDDVHVVGICGMGGIGKTTLGMVLYDRISHQFGACCFIDDVSKMFRLHDGPLDVQKQILHQTLGENHNQICNLSTASNLIRRRLCRQRVLMIFDNVDKVEQLEKIGVCREWLGEGSKIIIISRDEHILKNYGVDEVYKVPLLDWTNSLQLLCRKAFKLDHILNSYEGLVNGILHYANGLPLAIKVLGSFLFGRDISEWRSALARLKESPEKDVMDVLRLSFDGLKEQEKEIFLHIACFFNQVWGKYLKNVLNCCGFHADIGLRVLIDKSLISIDADGFIHMHGLLEELGREIVQENSSKEQRNWRRIWFVKQVNDVMLEKMEKNVEAIVLNHENDGEDDAKMVTIVEHLSKMRHLRLLIVRCPVNTSGNLSCFSKELRYVEWSEYPFKYLPSSFDSNQLVELILEYSSIEQLWKGKKHLPKLRNLNLSHSKNLIKMPHFGEFPNLERLDLEGCIKLVQLDPSLSLLTKLVYLNLKDCKCIIGLLSNNPRPLNIRASHSSSTTPSSLKRNMLPKHSSLQTPTTHTNLFSSLHSLCELNLSFCNLLQIPNAIGCLYWLEALNLGGNNFVTVPSLRELSKLVYLSLEHCKLLKSLPVLPSPTAIEHDLYKNNLPAFGTRWPIGLFIFNCPKLGETERWSSMTFSWMIQFIQANRQFSHDSSDRVQIVTPGSEMPSWFNNQSKGNLIRIDSSPIMHDNNNNIVGCVCCVVFSMTPRSHPTMRRSSPSRQTYLGLEFTDTHGRVIEKSNTGIQVTLNDRLITAKSNHIWLTYFPLDLSSDLLNRTLWVDTSRYENDLKIEVKNCGYRWVYKQDLQEFNLTKMNHRNSLGGKLKSLAIEGEAQ* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2590 1054 Pfam TIR domain 23 200 IPR000157 GO:0007165
Mtr4g2590 1054 MobiDBLite consensus disorder prediction 711 732 - -
Mtr4g2590 1054 Gene3D - 189 354 IPR027417 -
Mtr4g2590 1054 PRINTS Disease resistance protein signature 223 238 - -
Mtr4g2590 1054 PRINTS Disease resistance protein signature 300 314 - -
Mtr4g2590 1054 PRINTS Disease resistance protein signature 393 407 - -
Mtr4g2590 1054 PRINTS Disease resistance protein signature 634 650 - -
Mtr4g2590 1054 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 25 640 - -
Mtr4g2590 1054 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 654 705 - -
Mtr4g2590 1054 SUPERFAMILY "Winged helix" DNA-binding domain 429 533 IPR036390 -
Mtr4g2590 1054 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 654 705 IPR044974 GO:0006952
Mtr4g2590 1054 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 640 IPR044974 GO:0006952
Mtr4g2590 1054 Gene3D Ribonuclease Inhibitor 705 858 IPR032675 -
Mtr4g2590 1054 Gene3D Ribonuclease Inhibitor 540 704 IPR032675 -
Mtr4g2590 1054 Pfam NB-ARC domain 215 428 IPR002182 GO:0043531
Mtr4g2590 1054 Gene3D - 17 188 IPR035897 -
Mtr4g2590 1054 SMART till_3 22 162 IPR000157 GO:0007165
Mtr4g2590 1054 Pfam Leucine Rich Repeat 615 634 IPR011713 -
Mtr4g2590 1054 Gene3D - 359 442 IPR042197 -
Mtr4g2590 1054 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Mtr4g2590 1054 Pfam C-JID domain 883 1026 IPR045344 -
Mtr4g2590 1054 SUPERFAMILY L domain-like 562 820 - -
Mtr4g2590 1054 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 165 IPR035897 -
Mtr4g2590 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 452 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2590 Mtr-Chr4 39433146 39437392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2590 23 822 WRKY Transcription Factor Family AT4G12020 28.555 3.96e-74 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2590 - - mtr:MTR_6g088245 1161.36