Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2580 ATGGCTACCTTCATTTTAAGGTCTAATAAAATAGTCCATGCCTTGAGCTGGTTTTGTCTCATGCTAATGATTCATAAGAGTGCTGCATATGATTTCATAGTTGGTGGCCAAAAGGGTTGGAGTGTTCCAAGTGATTCCAACAATCCTTTTAATCAATGGGCAGAAAAGAGCCGTTTTCAAGTTGGAGACTCCCTAGTGTTCAACTACCAATCTGGCAAAGACTCTGTGCTTTATGTAAAGAGTGAAGACTATGCAAGTTGCAACACTGGTTCACCTATTACAAAATTCTCTGATGGTCACACAGTCTTCAAACTCAACCAATCAGGGCCTCATTTCTTCATCAGTGGAAACAAAGATAACTGTCTCAAAAATGAGAAAGTAACAGTGATTGTTCTGTCTGACAGAAGCAACAACAACAATTCATCAAACACCAACCAAACAAGCAATGCTACTCCACCATCACCTCAATCATCATCACCTCCTTCACCAGCACCTTCTAACCAAGAGGGTCAATCTCCACCTCCAGACACGAACCAAACACCACCTCCTACTGCTACTAGTGATCATGATCATCCTCCTCGTAATGGCGCTGCTTCAAACTTTGTCAGTCTAGCTGGCTCTGTTGGAACTTTCATGGCTTCAGCTCTAATTTTATCCAAGTATCTATGA 669 0.417 MATFILRSNKIVHALSWFCLMLMIHKSAAYDFIVGGQKGWSVPSDSNNPFNQWAEKSRFQVGDSLVFNYQSGKDSVLYVKSEDYASCNTGSPITKFSDGHTVFKLNQSGPHFFISGNKDNCLKNEKVTVIVLSDRSNNNNSSNTNQTSNATPPSPQSSSPPSPAPSNQEGQSPPPDTNQTPPPTATSDHDHPPRNGAASNFVSLAGSVGTFMASALILSKYL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2580 222 MobiDBLite consensus disorder prediction 134 199 - -
Mtr4g2580 222 CDD OsENODL1_like 30 132 IPR041846 -
Mtr4g2580 222 PANTHER BLUE COPPER PROTEIN 5 219 IPR039391 GO:0009055
Mtr4g2580 222 MobiDBLite consensus disorder prediction 154 181 - -
Mtr4g2580 222 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Mtr4g2580 222 MobiDBLite consensus disorder prediction 134 153 - -
Mtr4g2580 222 ProSiteProfiles Phytocyanin domain profile. 30 133 IPR003245 GO:0009055
Mtr4g2580 222 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 219 - -
Mtr4g2580 222 Pfam Plastocyanin-like domain 40 123 IPR003245 GO:0009055
Mtr4g2580 222 Gene3D - 30 146 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2580 Mtr-Chr4 39351258 39352325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2580 11 202 Phytocyanin Superfamily AT3G20570 43.750 1.71e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2580 - - gmx:100781182 305.834