Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2571 ATGGAACCAAGTTTTGATTGTGTTGCAAGCCTTCTTTGCACCGAAGAAGATAGCAGTGTTTTCGATGATGTTGAATATGGTGGTTCGATGGAGGATTACGAAGATTTGTGGCATCCTAGGAACGAACAACGCTCTGGTGGTGTCCCTAATGAGTTGCACTTGCCATTGCAGAGTGAAGAGTGTTTGGTTCTGATGTTGGAAAAAGAATGTCAACAATGGCATGGTGCTGATTACTTGAATAGGTTAAAGTTTGGAGATTTGGATTTTGGTGCAAGAAATGAAGCCATTGATTGGATTCAAAAGGTTCAATCACATTTCGGTTTTGGTCCGCTTTGTGTTTATCTATCCATTAATTACATGGATCGTTTCCTCTCTGCATATCAATTCCCAGAGAGAAGAGATTGGTCAATGCAATTGTTGGCTGTTGCTTGCTTATCTTTGGCAGCCAAAGTAGACGAAACCGATGTTCCTCGGATTCTTGAATTGCAGATTGGTGAATCCAAGTTTGTGTTTGAAGCAAAAACCATTCAGAAAATAGAGCTTCTGGTACTAACCACATTGAAGTGGAGAATGCAAGCAATTACTCCTTTCTCCTTCATTGAATATTTCCTTTCTAAGATTAATGATGATAAGAGTTCATTGAATAATTCTATAATTTTGCAATGTACTCAACTTATATCAAGCACCATTAAAAGTCCTGACTTCTTGGAATTCAAACCATCAGAGATTGCAGCAGCAGTGGCAACATATGTTGTAGAAGAATTTCAAGCAATTGATAGTAGCAAATCAATTTCTACTCTGATTCAATACATAGAAAAGGAGAGATTATTGAAGTGTGTTGAAAAGGTGCAAGAGATGTGTATTTTCACTGCCAAGGATTCAAATGCCTCTTCTGTCTCTAGTGTGCTTCAAAGCCCAATGGGTATGTTTGATACATTGCGCTTCCGCTACAAATGTGATGACAACAATGCTGGTGTTGATGCTAAGAGAAGGAAGCTAAACAAAAGATGTGGATTAGAGCTTCTGTAG 1029 0.3858 MEPSFDCVASLLCTEEDSSVFDDVEYGGSMEDYEDLWHPRNEQRSGGVPNELHLPLQSEECLVLMLEKECQQWHGADYLNRLKFGDLDFGARNEAIDWIQKVQSHFGFGPLCVYLSINYMDRFLSAYQFPERRDWSMQLLAVACLSLAAKVDETDVPRILELQIGESKFVFEAKTIQKIELLVLTTLKWRMQAITPFSFIEYFLSKINDDKSSLNNSIILQCTQLISSTIKSPDFLEFKPSEIAAAVATYVVEEFQAIDSSKSISTLIQYIEKERLLKCVEKVQEMCIFTAKDSNASSVSSVLQSPMGMFDTLRFRYKCDDNNAGVDAKRRKLNKRCGLELL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2571 342 SUPERFAMILY Cyclin-like 177 291 IPR036915 -
Mtr4g2571 342 SUPERFAMILY Cyclin-like 50 191 IPR036915 -
Mtr4g2571 342 CDD CYCLIN 92 184 IPR013763 -
Mtr4g2571 342 Pfam Cyclin, C-terminal domain 194 293 IPR004367 -
Mtr4g2571 342 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 324 - -
Mtr4g2571 342 SMART cyclin_7 97 185 IPR013763 -
Mtr4g2571 342 Gene3D - 75 192 - -
Mtr4g2571 342 SMART Cyclin_C_2 194 305 IPR004367 -
Mtr4g2571 342 Pfam Cyclin, N-terminal domain 64 191 IPR006671 -
Mtr4g2571 342 ProSitePatterns Cyclins signature. 92 123 IPR006671 -
Mtr4g2571 342 Gene3D - 65 282 - -
Mtr4g2571 342 PANTHER CYCLINS 1 324 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2571 Mtr-Chr4 39251581 39252609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2571 65 321 Core Cell Cycle Gene Families AT2G22490 44.361 7.06e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2571 K18810 - gmx:547739 399.823