Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2565 ATGACAATGGCTTGTAATAGCATCCGAAGTATCTCTTCACCTAAGATGAAATGGAAATATGATGTGTTTGTGAGCTTTAGAGGTGGCGACACACGCAACAATTTCACTGATCACCTTTTTGGCACTCTCCATAAAAAAGGCATTGTTACCTTCAGGGATGATACAAAGCTCAAGAAAGGGGAAAATATATCATCTGAGCTTCTACAAGCTATTGAAGGATCCCGTATTTTGATTGTTATCTTTTCAAGGAACTATGCTTCTTCAACGTGGTGCTTGAAGGAACTAGTAAAGATTGCTGAATGCATTGAAGTAACAGGACAAATTGTTCTACCTATTTTCTATGATGTGGATCCATCTGAGGTGCGAAAGCAAAGCGGAGATTATGAAAAAGCCTTTAGGGATCATGAAGAAAGATTCAAAGGAAATTTAGAGAAAGTGCAAAGATGGAGAGGAGCCCTAGCACAAGTAGCCGAACTCTCTGGTTGGGATGTAAGGGATCAGCCACAATATGCAGAGATTGGAAAAATTATTAAAGAGGTAACATGCTTATTGAGTCACAAATCTTCAACTTTACCTAACGATATAGTTGGGATGCACTCACGAGTCGAAGAATTAGAAAAGCTTTTGATTATGGACTCAGATGATGATGTTCGAGTGGTAGGGATTTGTGGAATGGGTGGAATAGGGAAGACTACTCTTGCTACTGCTTTGTATGATAGAATCTCTAATCAATTTGATGCTTGCTGCTTTATTGAGGATGTAAGTAAAATTTACGGAGACCATGGCCCGATTGGAGTGCAAAAGCAACTTCTTTGTCAAACTCTAAATGAAGAAAATCTTCAGATATGCAATCTTTTCATGGCATCTAATCTGATACGCACTAGGCTATGTCAAATAAAATCCCTTATAGTTCTTGATAATGTTGATCAAGTTGAACAACTGGATAAATTGGCTATGACACGAGAATGGCTAGGCACAGGGAGTAGAATCATCATAATTTCTAGAGATGTTCATATCTTGAGAGAGCATGGAGTAGATGAAGTGTACAAAGTTCGACTCTTGGATCATAATAATGCCCTTCAATTGTTTTGTAGGAAGGCTTTCAAGAGTGATGATATCATGAGCGGTTACATATACTTGACAGATGATGCACTAACATATGCCAATGGCCTTCCATTAGCAATTAAAGTTTTGGGCTCATTTTTGTATGGCCGAGATGTCTCTGAATGGAGAAGTGCATTGGCAAGGTTAAGAGAAAACCCAAGGACAGATATTATGGATGTACTTCGAATTAGTTTTGATGGACTAGAGGATACAGAAAAGGATATATTTTTAGATATTGCTTGTTTCTTTTATAAAAAATCGGAGACATACGTGAATAAAGTTTTAGATTTTCGTGGATTTCATCCTGAAATTGGTTTAAGAGTTCTTGTTGATAAGTCATTCATAACCTGTGAGAACGGGAGAATTTTTATGCATGATTTGTTCAAAGAACTAGGCAAGAGTATCGTTAGGGAAAAATCACCCAAAGAACCAAGAAAGTGGAACAGGATGTGGGACTACAAGGATGTCCACAATGTTATATCAGAAAACATGGCAACATCAAACCTTGAAGCCATAGTTCTGAGGCGTTATCCAGAAAATATTGAAGAAATACAGGGGATGACAACATTGAGAACTGAAGCTTTAGCACAAATGAGTCGCCTTAAATTGCTCATGCTGTGGAATTTGAATTTCTCAGGAAGTCTCAATTTTCTTTCTAGTCATTTGGGGTATCTCTGTTGGGATAAATATCCTTTCACTTGTTTGCCATCAAGTTTCCAGCCGGATAAACTTGTTGAACTGGTCCTACCTCGTAGCAACATCAGGCAACTATGGGAGGGCACAAAGTGTTTACATAATTTGACACATATTGATCTCTCTCACTCGGAAAATCTTATCATGATGCCCGATTTCTTGGAGATTCCAAATCTTGAGTTGCTAGATCTTGAAGGATGTATAAAACTCCAGCAGATCGATCCATCCATTGGTATCTTAAGAAGGCTTTCCAAATTAAATTTGAAAAATTGTAGAAATCTGGTAAGTATTCCTAGCAATATTTTTGGTCTGAGTTCTCTCAAACATCTAAATCTCTCAGGCTGTCCAAATTTACTTAATAATAAGATGTTAGAGAGACAAAGGCAAAATGAACATTTGGAGATGCTTGATATTAAAGAATGTACTACTCAATACCAACCAACATCCTTCATCTACAAAGTTCTAAAGCCGCACTTTCCATTTTCTTTTTTTCGAAAACGCGAAGATTCGGTTGGTTTATTGTTGCCTTCGTTGTCTTGTCTGTCATGTCTGCAATATCTTGACCTAAGTTTCTGCAATCTTTTTCAAATCCCTAATGCAATTGGAAGGCTACATTGCTTAGAAATTCTAAATGTGGGAGGAAACAATTTTGTTACTCTACCTTCTAGCATCAAGGAACTTTCCAAACTTAGACAGTTGAACTTGGAGCATTGTAAACAGCTGAAATATTTGCCTGAGCTCTCATCAAATACTGTCTTGCCAGTAGGAAAAACATTTTTTGGTAGATATGTAGCTGGATTATATATTTTTGACTGCCCCGGTTTAATTGAGATGGAATGCTGTTATAGAATGGCTTTTTCTTGGATGATACAACTCCTGAAGGTGCACATGCAATCCTACCTCCCAATGGGTCAGATAAATTTTGTTATTCCCAAAACTCAAATTCCAACGTGGTTCAACAAACAAAATGTAGGTAGTTCAATAAGCATTGACCCATCACCTGTTATGCATGACAATTTGATAGGCGTTGCTTGCTGCTTAACTTTTGTAGCACGTGATGGTCCAACTAATTTAAGTGAGACAGGTCAATATCAGGATAATCCGACTAATTTAGGTGCAGGATGGTCACCTTATATTGGATTTGGTTTTAAAAGTAAACATTGTGGACGCTTTCCCATTATTCCCATACATCTTGGAAAAGATCTGGTCACAGTTGATTTAGATCACTTGTTGCTAATTCTTTTCACTAGGGAAGAATTTATTAATTATTATATGAATTATATAACAAAGGGATTGCATGATATTAGTGGTATTGAATTGACAGCTGTAGTTGAGCAGCCCCTTGGTTTGCATTTGGAGGTAAAAAATTGTGGTTATCATTGGATATTTAAGGAGGATCTGGAACATTTAAACCCACAAATGATGTACAGTGGAAATTCCTCAGTTCAGCCATAA 3252 0.3724 MTMACNSIRSISSPKMKWKYDVFVSFRGGDTRNNFTDHLFGTLHKKGIVTFRDDTKLKKGENISSELLQAIEGSRILIVIFSRNYASSTWCLKELVKIAECIEVTGQIVLPIFYDVDPSEVRKQSGDYEKAFRDHEERFKGNLEKVQRWRGALAQVAELSGWDVRDQPQYAEIGKIIKEVTCLLSHKSSTLPNDIVGMHSRVEELEKLLIMDSDDDVRVVGICGMGGIGKTTLATALYDRISNQFDACCFIEDVSKIYGDHGPIGVQKQLLCQTLNEENLQICNLFMASNLIRTRLCQIKSLIVLDNVDQVEQLDKLAMTREWLGTGSRIIIISRDVHILREHGVDEVYKVRLLDHNNALQLFCRKAFKSDDIMSGYIYLTDDALTYANGLPLAIKVLGSFLYGRDVSEWRSALARLRENPRTDIMDVLRISFDGLEDTEKDIFLDIACFFYKKSETYVNKVLDFRGFHPEIGLRVLVDKSFITCENGRIFMHDLFKELGKSIVREKSPKEPRKWNRMWDYKDVHNVISENMATSNLEAIVLRRYPENIEEIQGMTTLRTEALAQMSRLKLLMLWNLNFSGSLNFLSSHLGYLCWDKYPFTCLPSSFQPDKLVELVLPRSNIRQLWEGTKCLHNLTHIDLSHSENLIMMPDFLEIPNLELLDLEGCIKLQQIDPSIGILRRLSKLNLKNCRNLVSIPSNIFGLSSLKHLNLSGCPNLLNNKMLERQRQNEHLEMLDIKECTTQYQPTSFIYKVLKPHFPFSFFRKREDSVGLLLPSLSCLSCLQYLDLSFCNLFQIPNAIGRLHCLEILNVGGNNFVTLPSSIKELSKLRQLNLEHCKQLKYLPELSSNTVLPVGKTFFGRYVAGLYIFDCPGLIEMECCYRMAFSWMIQLLKVHMQSYLPMGQINFVIPKTQIPTWFNKQNVGSSISIDPSPVMHDNLIGVACCLTFVARDGPTNLSETGQYQDNPTNLGAGWSPYIGFGFKSKHCGRFPIIPIHLGKDLVTVDLDHLLLILFTREEFINYYMNYITKGLHDISGIELTAVVEQPLGLHLEVKNCGYHWIFKEDLEHLNPQMMYSGNSSVQP* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2565 1083 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 162 IPR035897 -
Mtr4g2565 1083 Pfam NB-ARC domain 201 422 IPR002182 GO:0043531
Mtr4g2565 1083 PRINTS Disease resistance protein signature 219 234 - -
Mtr4g2565 1083 PRINTS Disease resistance protein signature 295 309 - -
Mtr4g2565 1083 PRINTS Disease resistance protein signature 388 402 - -
Mtr4g2565 1083 PRINTS Disease resistance protein signature 824 840 - -
Mtr4g2565 1083 Gene3D - 16 181 IPR035897 -
Mtr4g2565 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Mtr4g2565 1083 Gene3D - 182 347 IPR027417 -
Mtr4g2565 1083 Pfam TIR domain 19 168 IPR000157 GO:0007165
Mtr4g2565 1083 SUPERFAMILY L domain-like 494 851 - -
Mtr4g2565 1083 Pfam C-JID domain 909 1067 IPR045344 -
Mtr4g2565 1083 Gene3D - 353 437 IPR042197 -
Mtr4g2565 1083 SMART till_3 19 159 IPR000157 GO:0007165
Mtr4g2565 1083 Pfam Leucine Rich Repeat 783 798 IPR001611 GO:0005515
Mtr4g2565 1083 Pfam Leucine Rich Repeat 705 725 IPR001611 GO:0005515
Mtr4g2565 1083 Gene3D Ribonuclease Inhibitor 450 755 IPR032675 -
Mtr4g2565 1083 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 189 950 - -
Mtr4g2565 1083 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 189 950 IPR044974 GO:0006952
Mtr4g2565 1083 Gene3D Ribonuclease Inhibitor 766 898 IPR032675 -
Mtr4g2565 1083 Pfam Leucine Rich Repeat 611 630 IPR011713 -
Mtr4g2565 1083 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2565 Mtr-Chr4 39199342 39204564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2565 20 832 WRKY Transcription Factor Family AT4G12020 30.072 9.52e-90 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2565 - - mtr:MTR_4g080777 2165.19