Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr4g2541 | ATGGGAGGAATAGGAAAGACGACTCTAGCTACTGCTCTTTATGACAGAATCTCTCATCAATTTGATGCATGCTGCTTCATCGATGATATAAGCAAAGTTTATAGAAATGAAGGTCGATTGGTGCTCAAAAGCAAGCACTACATCAAACTCTTAGCAAACAGCACCTTCAGATATGCAATCTTTACAACAAAAACTAATTTGATACGACTCAAGCTAGGTCATATAAGAGCCCTTCTAGTTCTTGATAATGTTGATCAAGTTGAACAGCAGGAGAAATTAGCTGTGAGTAGTGAATGTTTAGGTGCTGGGAGTAGAATTGTTATAACTTCTAGAGATGTTCATATCTTGAAAGAGTACGAAGTTGATGAAATCGTCAATTAA | 381 | 0.3675 | MGGIGKTTLATALYDRISHQFDACCFIDDISKVYRNEGRLVLKSKHYIKLLANSTFRYAIFTTKTNLIRLKLGHIRALLVLDNVDQVEQQEKLAVSSECLGAGSRIVITSRDVHILKEYEVDEIVN* | 127 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr4g2541 | 126 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 121 | IPR027417 | - | |
| Mtr4g2541 | 126 | Pfam | NB-ARC domain | 1 | 119 | IPR002182 | GO:0043531 | |
| Mtr4g2541 | 126 | Gene3D | - | 1 | 125 | IPR027417 | - | |
| Mtr4g2541 | 126 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 1 | 121 | - | - | |
| Mtr4g2541 | 126 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 1 | 121 | IPR044974 | GO:0006952 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr4g2541 | Mtr-Chr4 | 38989916 | 38990296 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr4g2541 | 1 | 124 | WRKY Transcription Factor Family | AT5G45050 | 36.290 | 2.01e-17 | 75.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr4g2541 | - | - | mtr:MTR_4g080077 | 249.21 |