Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2531 ATGCGTCCACCAATGAGGAGAGTGGATTACAAAATAGGAGATAAAGTAGAAGTATGCAGTAAAGAAGAGGGGTTTTTCGGTTCGTACTACAAAGCCAGAGTTGTTTCACGTCTCCAAAATGGACAATACATGGTTCAATACAAGAATCTTTTGCTTGAGGACAAGTCTGGACCTCTTGTAGAGACCATTTATCCATATGAGCTACGTCCAACACCACCACGTGTTCGTAATCCTCATGAATTTCAACTCAATCAGAAAGTTGATGCTTTCCATAATGATGGTTGGTGGGTAGGGCAAATCACCAGTGAGAAGATCATCACTGCTGAAGAGGGCCATTGCTATTGGGTGTATTTCAGCACTAGCTCAGAGACGAATTACTACCGCTATGATCAGATCAGAGTTCATCATGAGTGGTTTGGTGGAGAGTGGATCTTGGATGCATAA 444 0.4257 MRPPMRRVDYKIGDKVEVCSKEEGFFGSYYKARVVSRLQNGQYMVQYKNLLLEDKSGPLVETIYPYELRPTPPRVRNPHEFQLNQKVDAFHNDGWWVGQITSEKIITAEEGHCYWVYFSTSSETNYYRYDQIRVHHEWFGGEWILDA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2531 147 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 145 - -
Mtr4g2531 147 PANTHER - 8 145 - -
Mtr4g2531 147 Pfam Agenet domain 13 73 IPR008395 -
Mtr4g2531 147 SMART agenet_At_2 79 140 IPR014002 -
Mtr4g2531 147 SMART agenet_At_2 8 76 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2531 Mtr-Chr4 38853348 38854060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2531 20 100 PHD Transcription Factor Family AT5G58610 31.000 6.49e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2531 - - cam:101489110 190.66