Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2508 ATGCAGAGAAATATTATTAGTAATAATAATGGGGTGCATCAAGCATGTGCAGCATGCAAGCATCAAAGGAAAAAATGCAGTGAAAATTGCATATTAGCACCATACTTTCCATCAAACAGAAGTAGAGAATTCAAAGCAGTGCACAAAGTGTTTGGTGTTAGCAACATAACAAAGTTTGTAAGGAATGCTCAAGAGGGAGATAGAAGAAAAGTTGTGGATTCATTGATATGGGAAGCACTTTCTAGGCAAAAGGATCCAATAAATGGTTCTTATGGAGAGTATACAAAAGTTTACAATGAGTATAAAAGATTATTTGATGAACTTAAGATGTTTAGAGATCATCAAAACCAATTGGTGCAAGTGCAACCTCAAGGGAAAGTTAGAGCAGAAACACCTGATCATAATGCTGTAGATTATCATCATCTTCATCATGGAAATCATAAGAATGGTATTGTTGATTCTACTACCATTTATAATACATATTGTTCAAATTATTTACAAGATCTTGATAGTTTGAGGACAGAAGTTGTCATCCCAAATATTCAGCAGCACTCACAGTCATACTATATTGCAGATATGTCTGATCAGAACCCAATTGATCCATCTAAGATGATTGGTGGTAGGCGTGCGTTGACTCAAAACCACCGAAAGGAGAGGCAAAGCGGGCACATCCCAAAGAGGGGAAGACGTGGGAGGGGGGATGGTTCAGGGACTTCGCAGGAGGCTTATCAGGCTACACAGCCTGAAAAGTCGCAGGATCATATACCAGAGCAGCAACATATAGCAGATGATGATGATATTGCAGCAGCGGTTGCCCCAGCAGTGTTACCTTTGGAGCCTCCCTTTCCTGGAGGATCGGAAGATATATCTCTGTTGCACTCTTATGCCAAGCATGTGGCATTGCCGCTTTAG 912 0.4024 MQRNIISNNNGVHQACAACKHQRKKCSENCILAPYFPSNRSREFKAVHKVFGVSNITKFVRNAQEGDRRKVVDSLIWEALSRQKDPINGSYGEYTKVYNEYKRLFDELKMFRDHQNQLVQVQPQGKVRAETPDHNAVDYHHLHHGNHKNGIVDSTTIYNTYCSNYLQDLDSLRTEVVIPNIQQHSQSYYIADMSDQNPIDPSKMIGGRRALTQNHRKERQSGHIPKRGRRGRGDGSGTSQEAYQATQPEKSQDHIPEQQHIADDDDIAAAVAPAVLPLEPPFPGGSEDISLLHSYAKHVALPL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2508 303 MobiDBLite consensus disorder prediction 237 252 - -
Mtr4g2508 303 MobiDBLite consensus disorder prediction 211 256 - -
Mtr4g2508 303 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 186 - -
Mtr4g2508 303 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
Mtr4g2508 303 Pfam Lateral organ boundaries (LOB) domain 15 110 IPR004883 -
Mtr4g2508 303 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 6 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2508 Mtr-Chr4 38658292 38661500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2508 13 123 AS2 family AT1G06280 58.559 9.08e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr4g2508 LOB 3.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2508 - - ahf:112769909 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2508 4 38658292 38661500 Mtr4g2508 4 38658292 38661500 ECH