Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2496 ATGGGATCCCAAAGTGAAGATCATGTTGCAAAATTGCTTCAAGCTCAAACCCAAGTATTCAACCACATTTTTAGTTTCATAAACTCAATGTCCCTTAAATGTGCAATTGAATTGTGTATACCAGATGTTATACACAACTATGGCCAACCAATCCCACTCTCAAAACTCATTTCTTTGTTACCAATCCACCCTTCCAAAACCGGTGACATACATCGTTTGATGCGAGTTTTAACACATTCTGGTTTCTTCAATGTCTCTAAAAATGATCTAGAAGTGATGTATGAGCTTAATGATGCATCTAGGTTATTGCTTAAGGACCATCCCTTTAGTATGACATCTTTGTTACATGTTATACTTGGTCCAATTCTGAGTAAACCATGGTATCAACTTTCTAATTGGTACAAAAATGATGACCCTTCACCTTTTCACACCGAAAATAACGGGGTTGCATTTTGGGATTATGCTGGCCATGATCCTAATCACAATAATTTGTTCAATGAAGCTATGGCTTGTGAAACTAGATTGGCTTCTAGTGTTGTGATGGGAAAGTGTAAAGGGGTGTTTGAAGGATTGGAATCATTGGTTGATGTTGGTGGAGGCATAGGGACTATTACTAAGGTCATTGCTAAGTCATTCCCAAACATTGAGTGCATTGTATTTGATCTTCCACATGTTGTTGATGGCTTACAAGGAAGTGAAAACTTAAAATATGTTGGAGGTGACATGTTTGAGGCTATTCCTCCTACCCATTCAATTTTACTCAAGGGTGTATTACATGACTGGAACGATGAGGAATGCTTGAAAATACTAAAGAAATGCAAGGAAGCAATAGGAAACAAAGGTAAAGAAGGGAAAGTGATAATCATAGACGCAGTGATGGGGAATGAGAAGGAAGACAATGAATCAATTGAAGCACAATTGTTCTATGATTTGGAGATGATGGTGTTGGTCAATGGAAAAGAGAGAAATGAAAAAGAATGGTCTAATTTGTTTTTATCTGCTGGTTTTAGTAACTACAAGATAACTCATGGTCTTGGTTTTAAGTCTCTCATTGAGGTTTTTCCCTAG 1068 0.3717 MGSQSEDHVAKLLQAQTQVFNHIFSFINSMSLKCAIELCIPDVIHNYGQPIPLSKLISLLPIHPSKTGDIHRLMRVLTHSGFFNVSKNDLEVMYELNDASRLLLKDHPFSMTSLLHVILGPILSKPWYQLSNWYKNDDPSPFHTENNGVAFWDYAGHDPNHNNLFNEAMACETRLASSVVMGKCKGVFEGLESLVDVGGGIGTITKVIAKSFPNIECIVFDLPHVVDGLQGSENLKYVGGDMFEAIPPTHSILLKGVLHDWNDEECLKILKKCKEAIGNKGKEGKVIIIDAVMGNEKEDNESIEAQLFYDLEMMVLVNGKERNEKEWSNLFLSAGFSNYKITHGLGFKSLIEVFP* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2496 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
Mtr4g2496 355 Gene3D - 2 103 IPR036388 -
Mtr4g2496 355 PANTHER ORCINOL O-METHYLTRANSFERASE 5 355 - -
Mtr4g2496 355 Gene3D Vaccinia Virus protein VP39 104 355 IPR029063 -
Mtr4g2496 355 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Mtr4g2496 355 Pfam O-methyltransferase domain 127 337 IPR001077 GO:0008171
Mtr4g2496 355 PANTHER O-METHYLTRANSFERASE 5 355 IPR016461 GO:0008168
Mtr4g2496 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 353 IPR029063 -
Mtr4g2496 355 CDD AdoMet_MTases 194 292 - -
Mtr4g2496 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Mtr4g2496 355 SUPERFAMILY "Winged helix" DNA-binding domain 11 108 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2496 Mtr-Chr4 38525938 38527669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2496 30 354 Monolignol Biosynthesis Gene Families AT5G54160 32.733 9.49e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2496 - K16040 gmx:100807238 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2496 4 38525938 38527669 Mtr4g2496 4 38525938 38527669 ECH