Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2492 ATGTTTGAGTCAAACAAATTTAAGATGCTAAAAAATATGGATGAAGTAGAAATCACAAATGCTAATTTCCCTCAAAATCCAACAATGAGTGCTTCTAATAATCCTCCTGCTTTGAAGAGAAAAAGAAACCTTCCAGGAAATCCAGATCCTGAAGCAGAAGTTATAGCTTTATCACCAAAGACACTCATGGCTACAAACAGATTCTTGTGTGAAACATGTGGGAAAGGTTTTCAAAGAGATCAAAATCTTCAACTGCATAGACGTGGACATAATCTTCCATGGAAGCTTAAGCAGAGAACAAACAAAGAAATAAAGAAGAGAGTTTATGTGTGTCCAGAGAAAACTTGTGTCCACCATGATCCTTCAAGGGCACTTGGTGACTTAACTGGGATAAAAAAGCACTTTTGTAGAAAGCATGGTGAAAAGAAGTGGAAGTGTGAGAAGTGCTCAAAACGTTATGCTGTTCAGTCAGATTGGAAAGCTCACTCAAAAACATGTGGTACTAGAGAATACAAATGTGACTGTGGAACTATCTTTTCAAGGAGAGACAGCTTCATAACTCACAGAGCCTTTTGTGATGCCTTAGCAGAAGAAACAGCAAGGGTAAGTGCAGCATCAGAAATAAACAACAGCTCATTATTAAGGGGTAACATTGGTAATTACACCAACATAATGGGAACAACATCTCTAGTCCCTAACAATAACATGCCAAACCATTTTCCTTCAATTTTCAAACCAATTTCAACTCCTGATCATCATCATCATCATCATCATGAATCAACCAATCAAACTAGAGGACTATCCCTTTGGATGAATCAAACTTCTCATTCTCAACCTCATGAAACAATGATAACCACCACCAATGGAAATTCTAGTTTGCATGAGATTCAACAACAACTTGACTCATCATCAAGAGAAATTATGTATGGTGGAAATGAGAACCCTCCACCATATTCTAATAATTATCAGCTAAATTGGGTTTTTGGAACTAAACTTTCAAACAATTGCAGCCAAGAATTAATTACTAGTACTACAACTTCACTTCCACTAGGAAACATTAATGTTAATGTTAAGGATGTTTCTCATGATGCTACAAGTCAACAAATTTCTTCCTTGTACAGCTCACAACACCAAATATCACATCAAACATCTTCAGCAAACATGTCAGCTACAGCTTTGTTACAAAAAGCTGCTCAAATTGGATCAACTTCAACTGATACATCATTCCTTGGAAGTTTAGGTTTGAAATGCAGTAATAATAATAGTACTAATGATGTGAACAAGTTTGGTGGTACTGGTATGTATGGTACTTCAAGTTCATTACTCATTAGTCTTGGCAATGAGGAAGATCATAATAATGCATGTGATTTTTCACAAATGCACCCTTCTAAACGTAGACATGTGCAAGGTGAAGAGAATGGAGGAGGAGGGCAAACTAGGGATTTTCTTGGTGTTGGTGTGCAAACCATTTGTCACCCTTCATCAATCAACGGTTGGATTTGA 1503 0.3679 MFESNKFKMLKNMDEVEITNANFPQNPTMSASNNPPALKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEIKKRVYVCPEKTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVSAASEINNSSLLRGNIGNYTNIMGTTSLVPNNNMPNHFPSIFKPISTPDHHHHHHHESTNQTRGLSLWMNQTSHSQPHETMITTTNGNSSLHEIQQQLDSSSREIMYGGNENPPPYSNNYQLNWVFGTKLSNNCSQELITSTTTSLPLGNINVNVKDVSHDATSQQISSLYSSQHQISHQTSSANMSATALLQKAAQIGSTSTDTSFLGSLGLKCSNNNSTNDVNKFGGTGMYGTSSSLLISLGNEEDHNNACDFSQMHPSKRRHVQGEENGGGGQTRDFLGVGVQTICHPSSINGWI* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2492 500 ProSiteProfiles Zinc finger C2H2 type domain profile. 68 90 IPR013087 -
Mtr4g2492 500 Gene3D Classic Zinc Finger 64 91 - -
Mtr4g2492 500 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 13 497 - -
Mtr4g2492 500 MobiDBLite consensus disorder prediction 20 37 - -
Mtr4g2492 500 Gene3D Classic Zinc Finger 102 192 - -
Mtr4g2492 500 PANTHER F-BOX ASSOCIATED PROTEIN 13 497 - -
Mtr4g2492 500 MobiDBLite consensus disorder prediction 20 50 - -
Mtr4g2492 500 ProSitePatterns Zinc finger C2H2 type domain signature. 70 90 IPR013087 -
Mtr4g2492 500 SUPERFAMILY beta-beta-alpha zinc fingers 67 164 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2492 Mtr-Chr4 38472534 38475031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2492 32 500 IDZ Gene Family AT1G03840 53.113 9.27e-154 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr4g2492 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2492 K25870 - gmx:100790620 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2492 4 38472534 38475031 Mtr4g2492 4 38472534 38475031 ECH