Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2490 ATGACTCAGTGCAGTGACCCTCAAAACAATGTGGTCATCACAGTGGATGGAAGAAAGGACAGCTTAATTAGAACTTGTCTCACATGTGGTCATCATATCAAAGGCCAAGATCAGGGTGGTGGAATTAATGACTTACCTGGATTGCCAGCTGGAGTGAAGTTTGATCCTACAGATCAAGAGATTCTTGAACATTTGGAAGCAAAGGCAAAGTCAGATATTCATAAGCTTCACCCTCTAATTGATGAGTTCATCCCTACTCTTGAAGGAGAAAATGGAATCTGCTATACTCATCCAGAGAAACTGCCAGGAGTAAGCAAAGATGGACTGATCCGCCATTTCTTTCACCGGCCATCCAAGGCATACACAACAGGAACTAGAAAAAGAAGAAAGGTACATTCCGATCACGAGGATGGAAGCGAAACCCGTTGGCACAAAACAGGTAAAACTAGACCAGTCTACAACAATTCCAAGTTAAAAGGTTACAAAAAAATTCTTGTACTTTACACAAACTATGGAAAACAAAGAAAGCCAGAGAAAACAAATTGGGTGATGCATCAGTATCATCTTGGGAGTGATGAAGAAGAGAAAGAAGGAGTGTTAGTTGTGTCCAAAGTTTTCTATCAAACTCAACCAAGACAGTGTGGTGGTAATTCATTGATTATGAAAGACTCTATTCTTGGAAAAACTATGAAGGGTCAAAGTGGGAATGAGGTAATGAATGGTAAAAATAGTACTAATGGATCATTTGTTGAATATTATCATTCAAATTTCATATCATTTGATCAAGGGAACCAACATAGGTCTAGCAATGCTCAAGTAATTTCACATTTTCAAGGTGCTCCTTTTAACCCTTGA 855 0.3883 MTQCSDPQNNVVITVDGRKDSLIRTCLTCGHHIKGQDQGGGINDLPGLPAGVKFDPTDQEILEHLEAKAKSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDHEDGSETRWHKTGKTRPVYNNSKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKEGVLVVSKVFYQTQPRQCGGNSLIMKDSILGKTMKGQSGNEVMNGKNSTNGSFVEYYHSNFISFDQGNQHRSSNAQVISHFQGAPFNP* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2490 284 MobiDBLite consensus disorder prediction 127 147 - -
Mtr4g2490 284 MobiDBLite consensus disorder prediction 122 150 - -
Mtr4g2490 284 Gene3D NAC domain 57 212 IPR036093 GO:0003677|GO:0006355
Mtr4g2490 284 ProSiteProfiles NAC domain profile. 48 208 IPR003441 GO:0003677|GO:0006355
Mtr4g2490 284 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 278 IPR044799 GO:0003700
Mtr4g2490 284 Pfam No apical meristem (NAM) protein 49 189 IPR003441 GO:0003677|GO:0006355
Mtr4g2490 284 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 278 - -
Mtr4g2490 284 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2490 Mtr-Chr4 38460173 38462740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2490 1 217 NAC Transcription Factor Family AT4G28500 69.869 3.11e-114 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr4g2490 NAM 3.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2490 - - gmx:100797459 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2490 4 38460173 38462740 Mtr4g2490 4 38460173 38462740 ECH