Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2469 ATGGTTTGTTTGGGGTTTGATATGGTTGAGGTTGAAGCTCAAAGGTTGGAACTTTGTTTGGTTAAGAGGAAGGAAGTTGGTCTTTTGTTGAGGACTGTGTTTGGTTTGTTGGTGTTTCTGCTGTTTCTTAGTCCTGTGACTGGTCTCAGACCATTAAGGGATAAAACTGGTTCATGGGGTGATGAGTGGATTTTTTCTGGAAAAGATGAAAGCGACATAGGTCCATTTTCACAATGGAATATAACTGGAACTTACAGAGGGACGTGGAAGTTTTTAGATACTACCAATGGCTCTTCTAAATTTCCGGACATCAGAAAAATAAATGGAAACTCTGTAATTGAATTAGTTAGTACACCCACAAAGATAACTGGTGTACATTATGTGCAGGGGGTTGTTATATTCCACGATGTGTTCGACAACGAATACAATGTTGGGGGTGCCCAAATCAAAATAGAAGGTGTATATATATGGCCTTTTAGACAACTTCGAATGGTAGCCAACAGCGGAAAAGAGGGAGGGTTGAATCAAGATGGAGATTATATTTTATCCAATCCATATCATCTGCTTGGAGTTTTCTCATCTCAAGTATTCCAAGAATCTTCGCGACATACAATGTGGAGAAGAAAGCATTCTCCATTGCATGGCATGGAGAAAAACTGTAACGTTGAAATTTCAGCACGGGTTTCACGCTTGTCATCGTCAAAACATGATGGGGAGCATGATTCTTTTCAGCTGGAAGGATTAATGGAAAGTCCGTCTGTGGATGACGATGGAGATTGCATCTCACCATTACAATTAAATGCAACATCTATTAATATTGGAGTCTACTACAATAAAGCAGTGAACTATACCTTGATGGTTACCTTTGTCTCATTCTTGCAAGTTCTTCTGTTGATTCGGCAAATGGAGCATAGCAACACACAATCTGGGGCAGCGAAGGTTTCAATAATAATGATTGGTCAGCAAGCTATAGTGGATGCTTATCTTTGCCTTGTACATCTGACTGCAGGAATACTAGTTGAGTCCTTGTTCAATGCTTTTGCAACCGCTGCATTTTTCAAGTTTGTAGTTTTCTCAATATTTGAGATGAGATATCTCCTTGCCATTTGGAAAGCAAGTCGGCCTTTGAGTAACGGTGAAGGTTGGGAGACAATGAGGCGCGAGCTTTCCGTTTTATACAGCCGTTTCTATGGGATTCTGTTGGGCGGTATTCTATTCATGTACGAATTCCATAATTATTTGAGACCTATTCTGCTTCTTGTATACTCCTTTTGGATACCTCAGATAATCACCAATGTTATTCGCGATTCACGCAAACCATTGCATCCTCATTATATATTAGGCATCACCGTTACTCGGCTAGCAATCCCATTATACGTTTTTGGTTGTCCTAACAACTTCTTGCGCATAGAACCAGATCAGAGCTGGTGTGTTTGTTTGGTTTTATTTACTGGATTTCAAGCCACAGTTCTCCTTCTTCAGCATTACCTCGGCTCCCGTTGGTTCATTCCTCATCAGATTCTACCTGAGAAATACAGCTATTATAGGAGGTCTTCTCAGGATACAAATCATGCCACGGACTGTGTTATTTGCATGACAGCCATTGATCTCACACCGCGATCAAATGATTGCATGGTGACGCCTTGTGATCATTTTTTCCACACTGGCTGCTTACAAAGATGGATGGATATAAAGATGGAGTGCCCAACATGTCGGCGCCCGCTCCCACCTGCATGA 1737 0.4116 MVCLGFDMVEVEAQRLELCLVKRKEVGLLLRTVFGLLVFLLFLSPVTGLRPLRDKTGSWGDEWIFSGKDESDIGPFSQWNITGTYRGTWKFLDTTNGSSKFPDIRKINGNSVIELVSTPTKITGVHYVQGVVIFHDVFDNEYNVGGAQIKIEGVYIWPFRQLRMVANSGKEGGLNQDGDYILSNPYHLLGVFSSQVFQESSRHTMWRRKHSPLHGMEKNCNVEISARVSRLSSSKHDGEHDSFQLEGLMESPSVDDDGDCISPLQLNATSINIGVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSIIMIGQQAIVDAYLCLVHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLSNGEGWETMRRELSVLYSRFYGILLGGILFMYEFHNYLRPILLLVYSFWIPQIITNVIRDSRKPLHPHYILGITVTRLAIPLYVFGCPNNFLRIEPDQSWCVCLVLFTGFQATVLLLQHYLGSRWFIPHQILPEKYSYYRRSSQDTNHATDCVICMTAIDLTPRSNDCMVTPCDHFFHTGCLQRWMDIKMECPTCRRPLPPA* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2469 578 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 513 578 IPR013083 -
Mtr4g2469 578 ProSiteProfiles Zinc finger RING-type profile. 528 572 IPR001841 -
Mtr4g2469 578 PANTHER TRANSMEMBRANE E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 16 578 - -
Mtr4g2469 578 PANTHER RING ZINC FINGER PROTEIN 16 578 - -
Mtr4g2469 578 SMART ring_2 528 571 IPR001841 -
Mtr4g2469 578 Pfam Ring finger domain 527 572 IPR001841 -
Mtr4g2469 578 SUPERFAMILY RING/U-box 509 577 - -
Mtr4g2469 578 SMART ringv_2 527 572 IPR011016 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2469 528 575 C3H Transcription Factor Family AT4G12190 39.583 1.73e-08 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2469 4 38289883 38296041 Mtr4g2469 4 38289883 38296041 ECH