Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2466 ATGGCTTCTTCTAGCATGTTTCTAATTGGTCTTGTGCTTTTATTGACACCAATGTTGCTTGAAGCAAAGGAGTTTCATGTTGGTGGCAAAGATGGTTGGGTCGTGAATCCTTCTGAAGACTACAATCAGTGGGCTCGAACACATAGGTTTCGAGTCAATGACACTCTCCATTTCAAGTACGTTAAAGGGAATGATTCGGTTCTTGTGGTGAAGAAAGAAGACTATGATTCTTGCAACACCAACAATCCAAAACAAAAATTGGACAATGGTAATTCCAAGTTTAAGCTGAGTGACTCGGGTTTCTATTATTTCATCAGTGGCAATGCTGACAACTGCAAGCATGATGAAAAGATGATTGTTCAAGTCATGGCTGTTCGCCCTAATGTCACACCTAATGTCACGGCTGTGCCACCATCTCAGCCTCCGGCAAGTGCGTCACCTCCTAAGATTCCGTTGACCTATGTAGATTCTCCGGCACCGTCTCCGTCCAAAGCAAGTTCTGTTGGGGTTGTGGTTTGGGTGGTTTTGATGTTGTTTGGTGGCTATGTAGGGTTTGTTTATTAG 564 0.4362 MASSSMFLIGLVLLLTPMLLEAKEFHVGGKDGWVVNPSEDYNQWARTHRFRVNDTLHFKYVKGNDSVLVVKKEDYDSCNTNNPKQKLDNGNSKFKLSDSGFYYFISGNADNCKHDEKMIVQVMAVRPNVTPNVTAVPPSQPPASASPPKIPLTYVDSPAPSPSKASSVGVVVWVVLMLFGGYVGFVY* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2466 187 Gene3D - 21 126 IPR008972 -
Mtr4g2466 187 PANTHER EARLY NODULIN-LIKE PROTEIN 1 5 134 - -
Mtr4g2466 187 CDD OsENODL1_like 23 123 IPR041846 -
Mtr4g2466 187 PANTHER BLUE COPPER PROTEIN 5 134 IPR039391 GO:0009055
Mtr4g2466 187 Pfam Plastocyanin-like domain 33 115 IPR003245 GO:0009055
Mtr4g2466 187 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Mtr4g2466 187 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2466 Mtr-Chr4 38270725 38271613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2466 6 177 Phytocyanin Superfamily AT4G28365 41.799 8.38e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2466 - - gmx:100778867 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2466 4 38270725 38271613 Mtr4g2466 4 38270725 38271613 ECH
Mtr2g3113 2 44821783 44823167 Mtr4g2466 4 38270725 38271613 PCT