Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2453 ATGGGTTGTTTATGTTCCAAGAGTTCAGCTGTGGAAGATAATAGTGAAAGTATATCAAAGAAATATCAATCAACTAGTACAAGAGTTTCTGAGTTGAATGTTTTGAGGTTGAATTCTTCAAAGAGGGTTGAGGGTGGAGGTGATGTGAGAGTGAAAGCTTCATCGAATGAAAAGAAATCAAATGGTTCTGGGCAGTTGTATGATGATCAAAATGGGAGGAAGAAGAAAATTGAGAAGAATGAGTTGACTGTTATTGATCATCCTGGATTTGGAAGAGTTCCAAAGGCTATAGAAGCCGAACAAGTTGCGGCTGGATGGCCGGCGTGGCTTTCTTCTGTTGCTGGTGATGCTATTAAGGGATGGATTCCGAGGAGTGCAAATACTTTTGAGAGGTTACATAAAATTGGGCAAGGAACTTATAGTACTGTTTATAAAGCTCGTGATGTGACTAATCAAAAGATTGTTGCATTGAAGAGGGTGCGGTTTGATAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGGGAAATACATATTTTGCGTAGGCTCGACCATCCAAACATAATCAAACTTGAGGGCTTGATAACCTCAGAAACATCTCGCAGCTTGTACCTTGTTTTTGAGTATATGGAACACGACCTAACAGGACTTGCATCAAATCCCAGCATCAAATTCTCTGAACCACAGCTGAAATGCTACATGCATCAACTTCTTAGTGGATTGGATCACTGTCATAGTCATGGTGTCCTCCACCGTGACATAAAGGGATCAAATCTTCTCATTGACAATAATGGTGTTTTAAAGATTGCTGATTTTGGTTTGGCAAATGTTTTTGACGCCCATCTCAATATTCCATTGACAAGCCGCGTAGTAACTCTGTGGTACAGACCACCTGAACTTTTACTCGGAGCAAATCATTATGGCGTTGCAGTGGATTTGTGGAGCACTGGTTGCATACTAGGGGAACTATATACGGGCCGTCCCATTTTGCCAGGAAAAACGGAGGTTGAGCAATTGCATCGGATTTTTAAACTTTGCGGCTCACCATCTGAGGACTATTGGCTTAAGTTGCGGTTGCCACATTCAACAGTATTCAAGCCTCCACATCATTATAGACGATGTGTTGCTGATACATTTAAGGAATACTCATCAACTGCTCTTAAGCTTATAGAGACCCTACTTTCTGTAGATCCATCAAATCGAGGGACGGCAGCTGCTGCTCTGAAAAGTGAGTTCTTTACATCAGAACCTTTGCCTTGTGATCCATCAAGTTTACCAAAATATCCTCCTAGCAAGGAGATTGATGCTAAAATGCGGGATGAAGCAACTAGAAGGCAAGGAGCTGTTGGAGATAAGGAACAAAGATCTGGCTCAGCGGTTAGACAAGAAAAAGGACCTAGAGCTGCTGTCTTGACAAAAGATAATGCTGACTTGGGCGCGTCAATACAGCAGAAACATTATTCCATCACAAAGAACCGAAGTGAATTGTCCTACCCTCATAGAGAACATGTGTCTGGCACTCAGGGCTACCCACACAAACAATCAAAAGATGTTAAAGAAACAGAAAATAATTTATCTGGCCACTTTTATAATAGACCGTCACATTCAGGCCCATTGGTTCCTGGTTCTGGTTGGGCCAGGGGTGCGAAGGAAGTTGATAATGGACCTACAGTTTCAAACAGAGTGAACCTATCGAAACTATCCGGGCTAGTTGCATCTAGGACTTTATTGTCAGAAGATCAGGAGCCAAAACCAGTTCCCTCCTTTCCCTACAGAAAATCAATTGAAGTAAGAAAATCCGTCGAGGCGACTAATGGATCAGAGTCAAGAAGAAGGCGGGATAAAAAACGTATTGTTGATCAAAGTCAAATTGTAAATAGAAGAGTCCCAACTGAAAAATCAACTCCGGATGGACATGGATCTAGTGGAAACAAGATATACATGTCAGGTCCATTACTGGCTTCAAACAATATGGATCAGATGCTCAAAGACCATGATCGTAAGATCCAAGAGTTTTCAAGACGAGCAAGAGGTGATAAAGTCCGTGCACAGAGAAAGTAG 2061 0.4178 MGCLCSKSSAVEDNSESISKKYQSTSTRVSELNVLRLNSSKRVEGGGDVRVKASSNEKKSNGSGQLYDDQNGRKKKIEKNELTVIDHPGFGRVPKAIEAEQVAAGWPAWLSSVAGDAIKGWIPRSANTFERLHKIGQGTYSTVYKARDVTNQKIVALKRVRFDNLDPESVKFMAREIHILRRLDHPNIIKLEGLITSETSRSLYLVFEYMEHDLTGLASNPSIKFSEPQLKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLANVFDAHLNIPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKLRLPHSTVFKPPHHYRRCVADTFKEYSSTALKLIETLLSVDPSNRGTAAAALKSEFFTSEPLPCDPSSLPKYPPSKEIDAKMRDEATRRQGAVGDKEQRSGSAVRQEKGPRAAVLTKDNADLGASIQQKHYSITKNRSELSYPHREHVSGTQGYPHKQSKDVKETENNLSGHFYNRPSHSGPLVPGSGWARGAKEVDNGPTVSNRVNLSKLSGLVASRTLLSEDQEPKPVPSFPYRKSIEVRKSVEATNGSESRRRRDKKRIVDQSQIVNRRVPTEKSTPDGHGSSGNKIYMSGPLLASNNMDQMLKDHDRKIQEFSRRARGDKVRAQRK* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2453 686 MobiDBLite consensus disorder prediction 8 26 - -
Mtr4g2453 686 ProSiteProfiles Protein kinase domain profile. 129 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2453 686 MobiDBLite consensus disorder prediction 441 468 - -
Mtr4g2453 686 MobiDBLite consensus disorder prediction 502 560 - -
Mtr4g2453 686 MobiDBLite consensus disorder prediction 624 656 - -
Mtr4g2453 686 Pfam Protein kinase domain 129 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2453 686 MobiDBLite consensus disorder prediction 600 686 - -
Mtr4g2453 686 SUPERFAMILY Protein kinase-like (PK-like) 122 421 IPR011009 -
Mtr4g2453 686 Gene3D Transferase(Phosphotransferase) domain 1 212 452 - -
Mtr4g2453 686 MobiDBLite consensus disorder prediction 660 678 - -
Mtr4g2453 686 MobiDBLite consensus disorder prediction 1 26 - -
Mtr4g2453 686 MobiDBLite consensus disorder prediction 43 73 - -
Mtr4g2453 686 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Mtr4g2453 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Mtr4g2453 686 PANTHER CYCLIN-DEPENDENT KINASE 32 677 - -
Mtr4g2453 686 Gene3D Phosphorylase Kinase; domain 1 116 211 - -
Mtr4g2453 686 MobiDBLite consensus disorder prediction 441 460 - -
Mtr4g2453 686 PANTHER CELL DIVISION PROTEIN KINASE 32 677 - -
Mtr4g2453 686 SMART serkin_6 129 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2453 686 CDD STKc_CDK9_like 129 413 - -
Mtr4g2453 686 MobiDBLite consensus disorder prediction 600 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2453 Mtr-Chr4 38129947 38134538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2453 121 446 Core Cell Cycle Gene Families AT5G10270 49.284 2.73e-111 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mtr4g2453 Pkinase 1.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2453 - - gmx:100807590 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2453 4 38129947 38134538 Mtr4g2453 4 38129947 38134538 ECH
Mtr2g3096 2 44653152 44657885 Mtr4g2453 4 38129947 38134538 PCT