Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2447 ATGGGAGGTGGAGGAGGTAACAATGAAGAAGAAAACAAGTGGCCACCATGGTTGCAACCACTTCTTCAAACAAGTTTCTTTGTTCAATGCAAAGTCCACTCAGATTCACACAAGAGTGAATGCAATATGTATTGCTTGGATTGTAACAATGGAGCCCTCTGTTCTGTTTGTCTTGCTTCTCATAAACAACATAGAACAATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTTTCTGAGATACAGAAATTTCTGGACATAGCAGAGGTTCAAACATATGTTATAAACAGTGCAAAGATTGTGTTTTTGAATGAAAGGCCTCAACCTAGGCCTGGAAAAGGGGTCACCAACACCTGCCAAGTCTGTGACCGCAGCCTTCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAGAAGTTGAGGAAGAATAAAATGTTGAGTCAGAAAGATGGGTCTGATGGTGAAGAGTCAATGAATGGCATTAGCAATGGAAGTGGCAGAAACAGAAGTCATAGTTTTACACCTTCAACACCACCTCCAACAGCAGTGAGTTACAGAACAGTTAAGAGGAGGAAAGGAATTCCACATAGAGCTCCAATGGGGGGAGGAATCATTATAGAATTCTAA 651 0.4147 MGGGGGNNEEENKWPPWLQPLLQTSFFVQCKVHSDSHKSECNMYCLDCNNGALCSVCLASHKQHRTIQIRRSSYHDVIRVSEIQKFLDIAEVQTYVINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFSFCSLGCKIVGTSKKLRKNKMLSQKDGSDGEESMNGISNGSGRNRSHSFTPSTPPPTAVSYRTVKRRKGIPHRAPMGGGIIIEF* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2447 216 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 211 - -
Mtr4g2447 216 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 211 - -
Mtr4g2447 216 MobiDBLite consensus disorder prediction 160 191 - -
Mtr4g2447 216 MobiDBLite consensus disorder prediction 152 210 - -
Mtr4g2447 216 Pfam PLATZ transcription factor 70 141 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2447 Mtr-Chr4 38067390 38069840 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mtr4g2447 PLATZ 4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2447 - - gmx:100796834 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2447 4 38067390 38069840 Mtr5g0137 5 1265266 1267490 ECH
Mtr4g2447 4 38067390 38069840 Mtr4g2447 4 38067390 38069840 ECH