Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2446 ATGAGAGAAATTTGTCAACACTTCCTGCGAGGCAGGTGTAGATTTGGAACTACTTGTAGAAACATTCATCAACAACAACAGAGAACATCTAATAATAATGGGTTTGGTGGTGGTGGTGGAGGAGGACAACAAAATACAAACCCTTTTGGATTTGGTTCTACCTCTACCTCTGCCTCTAACAACCACCAACCAAAGACCAACCCTTTTGGTTTTGGTTCACAAAACAATGGGGCTCCTCGTTCTGATTTCAAACCAAACCAATCCCAGCCTCTTGAAAACAACAAATGGAGTCGGTCTTCATCCAAGCCCCAGAACGGCACTCCACGTCAGTCTGATAACAATTCTCAAACAGTGAATCATAAATGTACAGATCCCGAGGCTTGCAAGCGCCAGATTGTAGAAGATTTTCAGCAAGAGAAACCACTTTGGATTCTTACATGCTATGGTCACTGTAAAGGTGCTCCTTGTGACATTGTTGGAGATATTAGCTATGAAGAATTACGGGCAGCGGCTTATGAGGATAATAAGAAAGGAATGAGTTTGCCACAAATTGTTGAGAAAGAGAAAAACATATTACAATCCAAGTTGGTTGAGTTTAACAAACTACTTTCTGAACCCTACAAAATGCCTCTGACGTCTTCTCTCAACATTCAAAACTTCCAATCCAATGGAGCCAACGTAAATGCCTTTCAACCAGCCACTCAAAACTTCCAATCCAATGGAGCCAATGCAAATGCCTTTCAACCAGCCACTCAAAATAATGGTCCTTTATCAGTCTCAAGCTTTAGCCAACTGGGTGCTTCACTGAACCCTGGCTTTGGAAGGCCTTCTGCACCATTAATGAGTACTCCGGTGCAGCCTAGTTCCATTGGAGGTGGAGGAAACTTTTTCACACCCAACTCAGGAAATCTATTCGGCAGTGGAATCTCTGGTGGTCAAGTCAACCCCTTTCCTACACCAGTGGGGTTGACAGGGTTTCCAGGTTCTACTTCCCAGTTCCAACAACCACCCTTTGGGTTCAATAACACTAGCTCCACTACAATGTTTCAGACAGCACCAGATGTGCAGCTAAATACGTCCCAAGTGGAGAATGTGTCTGTGGATGATAGTATCTGGTTAAAGGAGAAATGGAATCCTGGAGAGATTCCAGAACAAGCTCCTCCAGATAGATTTGTTTGGTAG 1182 0.4357 MREICQHFLRGRCRFGTTCRNIHQQQQRTSNNNGFGGGGGGGQQNTNPFGFGSTSTSASNNHQPKTNPFGFGSQNNGAPRSDFKPNQSQPLENNKWSRSSSKPQNGTPRQSDNNSQTVNHKCTDPEACKRQIVEDFQQEKPLWILTCYGHCKGAPCDIVGDISYEELRAAAYEDNKKGMSLPQIVEKEKNILQSKLVEFNKLLSEPYKMPLTSSLNIQNFQSNGANVNAFQPATQNFQSNGANANAFQPATQNNGPLSVSSFSQLGASLNPGFGRPSAPLMSTPVQPSSIGGGGNFFTPNSGNLFGSGISGGQVNPFPTPVGLTGFPGSTSQFQQPPFGFNNTSSTTMFQTAPDVQLNTSQVENVSVDDSIWLKEKWNPGEIPEQAPPDRFVW* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2446 393 ProSiteProfiles Zinc finger C3H1-type profile. 1 26 IPR000571 GO:0046872
Mtr4g2446 393 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16 2 391 - -
Mtr4g2446 393 PANTHER MAKORIN-RELATED 2 391 IPR045072 -
Mtr4g2446 393 MobiDBLite consensus disorder prediction 24 121 - -
Mtr4g2446 393 Gene3D - 1 65 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mtr4g2446 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2446 K14321 - gmx:100814339 439.499