Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2432 ATGACAGCTGGGATCGCGAATTATGTATTACCACCATTCTTAAGCAAAACCTACGATATGGTTGATGACTCTTCAACCGAATCGATCGTTTCATGGGGTAAAAACAACAACACCTTCGTCGTGTTGAATTCCACCGATTTCTCCAAACACATCTTGCCTAAATATTTCAAACACAACAACTTCTCCAGCTTTGTCAGACAATTGAACACCTACGGTTTTAGAAAGGTTGACCCCGACCGCTGGGAATTTGCTCATGAAGGATTTTTAAGGGGTCAAAAACATTTGTTAAAGAATATCAATAGGCGGAAATCTACTCATGCAAATGGTAATAATCAGCAGCTATCTAAGCCGCAGAACCCACCTGTTGGGTCATGTGTGGAAGTGGGTAAGTTTGGGCTTGATGAAGAGGTTGAAAGACTGAAAAGGGACAAGAATGTTCTTATGCAGGAACTTGTTAAGTTAAGACAGCAACAACAATCGACTGATAACCAATTGGTAAATGTTGGGCAACGTGTGCAAGTGATGGAGCAGCGTCAGCAACAGATGATGTCCTTTCTGGCAAAGGCCATGAATAGTCCGGGCTTTATGGCTCAATTTTCACAGCAGCAGAATGAAAGTAATAGACATGTTACCGCAGGTAAAAAGAGGCGGCTCCAGGGGCAGGAAGAAGATAGTTTAGCCACCAAGAATCCCCATAATCCTCTTGATGGGCGTGTTGTTAAGTACCAGCCTTCGATTAATGAGGCTGCAAAAACATTATTTAACCAGATGTTGCAAATGAACAGTTCTGCAAGGGTGGATTCCTCCATCAAGAACCTTGATGCATTCCTTATTGATGATGTTCCTTCGGCCATTCCATTAGATAGCAGTAGTTCGTCCACCCAAGTTTCTGGTGTAACACTTTCTGACGTTTCACCTATTTCTGGGCAGTCATGTATAGCAGTAGAATCTCAATTTCCTGTAAGTTGTATGACCAATAGCATGTCTGAGGTACAATCTTCACCTGCTGTGTTAACTGACTGTGTCAAAACTGCTGAATTTCCCGAATTTACAACAGCACACCAAGACAATATTTTGGATTTTGGTGAAGTTCATGGACTGGCTACAGAGAGCAGCTTCATGAATCCTGATCAAAATTTTGTGGGGTCTGTCGGTGAGAATGATGAGGAATTGGATGTGATATCAGCTGTTTTGGATGGGACACAGTCTTTGGAAGCTGATGCTTTTTCTTCTGATGCGAATGAAAATTCCAAGCTTCCAGGAATCAACGATGAGTTCTGGGAACAATTTTTTAGGCCAAGCCCACTTACTGGAGACACAGACGAAGTTAAAGGTAGTTCTCTAGGATATGGTTTGACTAAAGACCAGGAATTGTCATTAGCAAAGAAGATTCAACAAGAAAAGATGGATAAGATACAGCACATGGACCATCTTACTCAACAGATGGAACTTCTTGCATCGGACTCGACATTGTGTATATAA 1482 0.4184 MTAGIANYVLPPFLSKTYDMVDDSSTESIVSWGKNNNTFVVLNSTDFSKHILPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFAHEGFLRGQKHLLKNINRRKSTHANGNNQQLSKPQNPPVGSCVEVGKFGLDEEVERLKRDKNVLMQELVKLRQQQQSTDNQLVNVGQRVQVMEQRQQQMMSFLAKAMNSPGFMAQFSQQQNESNRHVTAGKKRRLQGQEEDSLATKNPHNPLDGRVVKYQPSINEAAKTLFNQMLQMNSSARVDSSIKNLDAFLIDDVPSAIPLDSSSSSTQVSGVTLSDVSPISGQSCIAVESQFPVSCMTNSMSEVQSSPAVLTDCVKTAEFPEFTTAHQDNILDFGEVHGLATESSFMNPDQNFVGSVGENDEELDVISAVLDGTQSLEADAFSSDANENSKLPGINDEFWEQFFRPSPLTGDTDEVKGSSLGYGLTKDQELSLAKKIQQEKMDKIQHMDHLTQQMELLASDSTLCI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2432 493 ProSitePatterns HSF-type DNA-binding domain signature. 52 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr4g2432 493 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1E-LIKE 5 464 - -
Mtr4g2432 493 SMART hsfneu3 9 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr4g2432 493 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 464 IPR027725 -
Mtr4g2432 493 Gene3D - 6 103 IPR036388 -
Mtr4g2432 493 PRINTS Heat shock factor (HSF) domain signature 13 36 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr4g2432 493 PRINTS Heat shock factor (HSF) domain signature 51 63 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr4g2432 493 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mtr4g2432 493 SUPERFAMILY "Winged helix" DNA-binding domain 10 102 IPR036390 -
Mtr4g2432 493 Coils Coil 130 157 - -
Mtr4g2432 493 MobiDBLite consensus disorder prediction 200 237 - -
Mtr4g2432 493 MobiDBLite consensus disorder prediction 209 223 - -
Mtr4g2432 493 Pfam HSF-type DNA-binding 13 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2432 Mtr-Chr4 37933468 37936654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2432 10 489 HSF AT5G16820 48.996 2.12e-137 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mtr4g2432 HSF_DNA-bind 1.3e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2432 K09419 - gmx:100793665 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2432 4 37933468 37936654 Mtr4g2432 4 37933468 37936654 ECH