Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2429 ATGGCGACGGGTTTGGAAGGAGATATTGCGAGTCTTCAACCAGTTGAAGATGAAGACAGAAAGCAAGATTCAGAGAAGAGCAAGGACAAAGATGAAATCACCAACACAGTATCCTTATACAAGCTTTTCTCATTTGCTGATCCTTTGGATTGTTTATTGATGCTTATGGGGACTGTAGGTGCTATTGGGAATGGAATCTCTTTACCCTTGATGGTTTTAATATTTGGAACTATGATCAATGCATTCGGAGAATCCACAACGTCAAAAGTTGTTGATGAAGTCTCCAAGGTGTCTCTGAAATTTGTATACCTGGCGGCGGGTAGCTTTGTTGCGTCATGTTTGCAGGTAACTTGCTGGATGATCACTGGGGAGAGACAGAGTGCAAGAATTAGAGGCTTATACCTTAAAACAATTTTGAGGCAAGATGTGAGCTTTTTTGATAAAGAAACTAACACTGGAGAGGTTGTTGGAAGGATGGCAGGTGACACTGTTCTTATTAAAGATGCCATGGGGGAGAAGGTGGGACAGTTTATACAGTTTGTGGCAACTTTCATAGGAGGTTTTGTCATAGCATTCACTAAGGGATGGCTTCTAACTGTTGTCATGCTATTTAGTATACCACTTCTTGTATTGTCTGCTGCTGTGACGAGTAAGGTTATTGCAAAAGCATCATCAACTGGACAAGCAGCTTATTCTGAATCAGCAAGTCTAGTAGAGCAGACAATTGGTTCCATCCGAACTGTTGCATCATTCACTGGGGAGAAACAAGCTACAACAAAATATAATCATTCCTTAATCAAGGTTTACAATACTACAGTGCAAGAGGCACTAGCATCTGGTGTGGGGTTTGCTACAATCTTTTTTGTTTTTATCTCCAGTTACAGTTTGGCTGTATGGTTTGGTGGGAAATTGATAATAGAGAAAGGATATACAGGAGGCGATGTTATGACTGTACTATTTGCAATATTGACTGGTTCAATGTGTCTTGGGCAAACATCTCCAAGCCTAAGTGCTTTTGCTGCAGGACAAGCTGCAGCCTTTAAGATGTTTGAAACAATAAAAAGGAAGCCAGAAATTGATGCTTATGAAACTACTGGGAGAAAGCTTGATGATATTCGCGGAGACATAGAGCTTATAGAGGTGTGCTTTAGTTATCCTACAAGACCAGATGAACTGATATTCGATGGATTTTCTCTTTCATTACAAAGCGGCACCACTGCAGCTTTGGTAGGGCAAAGTGGGAGTGGGAAATCTACAGTCATCAGTTTAATAGAGAGATTCTATGATCCAACAAATGGTGAAGTTCTCATTGACGGTATCAGCCTCAAAGAATTTAATCTGAAATGGATCAGACAGAAAATAGGCCTAGTCAGCCAGGAACCCGTTCTCTTTACTTGTAGCATTAAGAAGAATATTTCCTATGGCAAGGATGGGGCAACTGTTGAGGAAATAAGAGCTGCAGCGGAACTTGCTAATGCTGCCAAATTTATAGACAAACTCCCTCAGGGACTAGACACGATGGTTGGTGAGCATGGAATACAACTCTCTGGAGGACAAAAGCAAAGAGTTGCAATTGCAAGAGCAATTTTGAAAGACCCAAGAATCTTACTTCTTGATGAAGCTACAAGTGCCCTTGATGCAGAATCTGAGAGAATTGTACAAGAGGCATTGGAAAGAATAATGATAAACCGGACGACAATCGTCGTAGCTCACCGCTTAAGTACAATCAGAAATGTTGATACCATTGCTGTCATTCGTCAAGGAAAAATAGTTGAACGAGGTTCACATGTCGAGCTCACCAAGGATGCTAATGGTGCCTATAGCCAGCTAATTAGACTGCAAGAAATGAAGGGGTCAGAACAAAATGTTGCCAATGACTCAAATAAATCAAACAGTATAATGCTATCTGAAAAACGATCAAGTGAAATATCTTTATCCTCAAGATTCATAAGGCAAGTGTCATCTGGAAACAGTGGTCGTCACTCTTTTTCAGCATCATGTGGTGCACCCACAACAGATGGCTTCTTAGAGACTGCAGATGGTGGACCTCAAGCTTCTCTTTCAACAGTTTCTTCACCACCAGAAGTGCCACTTTATCGCCTGGCATATTTTAACAAGCCTGAGATTTCAGTCTTATTGATGGGTACTATAGCTGCAGTGCTGAATGGAGCAATAATGCCCACTTTTGGGCTCTTGATTTCTAAAATGATAAGTATTTTCTACAAACCAGCTGATGAACTTCGTCATGATTCAAAAGTTTGGGCAATGGTGTTTGTAGCGGTTGGTGTGGCATCATTACTAGTTATTCCATGTAGATACTACTTTTTTGGCATTGCTGGAGGTAAGTTGATCCAAAGAATCCGAAAAATGTGTTTCGAGAAAGTAGTTTACATGGAAGTAAATTGGTTTGATGAGGTTGAGCATTCAAGCGGAGCACTTGGAGCAAGGCTCTCCACAGATGCAGCTTTGGTTAGAGCTCTGGTTGGGGATGCACTTGGTCTGTTGGCTGAAAATATTGCTACATCAATAACTGGCTTGGTAATTGCTTTTGAAGCGAGCTGGCAGCTTGCTTTTATAGTCCTTGCTTTAGCGCCTCTATTAGGACTAGATGGATATGTTCAAGTAAAGTTCTTGAAAGGATTCAGCGCAGATGCAAAGAAATTGTACGAGGAAGCAAGTCAAGTGGCAAATGATGCGGTAGGGTGTATAAGAACAGTTTCTTCTTTCTGTGCTGAAGAGAAGGTGATGGAATTATATGAGCAAAAATGTGAGGGACCAATTAAGAAAGGCATAAGGCGAGGGATAATAAGTGGATTAGGTTTTGGTTTATCATGCTTCCTGTTGTATGCAGTTTATGCCTGTTGTTTCTATGCTGGAGCTCGACTCGTAGAGGATGGTAAATCCACATTCTCAGATGTTTTCCTTGTAATTTTTGCTCTCGGCATGGCAGCTTCGGGAGTCTCTCAATTAGGGACCTTGGTCCCAGATTTAATTAATGCAAAAAGTGCTACTGCTTCAATATTTGCAATTCTTGATCAGAAGTCACAAATAGATTCTAGTGATGAATCTGGGATGACACTGGAAGAAGTCAAGGGAGAAATTGAGTTTAACCATGTTAGTTTCAAGTATCCTACTAGACCTGATGTTCAAATATTCAAAGATCTTTGCTTGAACATTCATAGCGGCAAGACGGTTGCCCTGGTTGGAGAAAGTGGAAGTGGAAAATCAACAGTGATGTCCTTATTACAAAGATTTTATGACCCTAACTTAGGACACATAACTCTTGATGGAAAAGAAATTCAAAGGCTTCAACTGAAATGGCTGAGACAACAAATGGGGCTAGTAAGCCAAGAGCCTGTTCTTTTCAATGACACAGTCCGAGCCAATATTGCATACGGAAAAGGAGGAGATGCAACAGAAGCAGAAATTGTAGCCGCGGCAGAACTAGCAAATGCTCACCAGTTCATTAGTAGTTTGCAGAAGGGCTATGACACGATAGTAGGCGAGAGAGGAATTCAATTATCCGGGGGACAGAAGCAGCGGGTGGCAATTGCAAGAGCGTTGGTGAAGAATCCGAAAATACTATTACTAGATGAAGCAACTAGTGCACTTGATGCTGAGTCTGAAAAAGTGGTGCAAGATGCACTTGACTGTGTTATGGTGGACCGAACAACAATAATAGTAGCTCATAGGTTATCGACTATAAAGGGTGCAGATTTAATTGCAGTCGTTAAGAATGGTGTGATATCAGAGAAAGGAAAACATGAGGCATTGCTACATAAGGGTGGTGACTATGCTTCTTTAGCAGCATTACACACAAGTGCTTCTACATCTTAG 3837 0.4113 MATGLEGDIASLQPVEDEDRKQDSEKSKDKDEITNTVSLYKLFSFADPLDCLLMLMGTVGAIGNGISLPLMVLIFGTMINAFGESTTSKVVDEVSKVSLKFVYLAAGSFVASCLQVTCWMITGERQSARIRGLYLKTILRQDVSFFDKETNTGEVVGRMAGDTVLIKDAMGEKVGQFIQFVATFIGGFVIAFTKGWLLTVVMLFSIPLLVLSAAVTSKVIAKASSTGQAAYSESASLVEQTIGSIRTVASFTGEKQATTKYNHSLIKVYNTTVQEALASGVGFATIFFVFISSYSLAVWFGGKLIIEKGYTGGDVMTVLFAILTGSMCLGQTSPSLSAFAAGQAAAFKMFETIKRKPEIDAYETTGRKLDDIRGDIELIEVCFSYPTRPDELIFDGFSLSLQSGTTAALVGQSGSGKSTVISLIERFYDPTNGEVLIDGISLKEFNLKWIRQKIGLVSQEPVLFTCSIKKNISYGKDGATVEEIRAAAELANAAKFIDKLPQGLDTMVGEHGIQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALERIMINRTTIVVAHRLSTIRNVDTIAVIRQGKIVERGSHVELTKDANGAYSQLIRLQEMKGSEQNVANDSNKSNSIMLSEKRSSEISLSSRFIRQVSSGNSGRHSFSASCGAPTTDGFLETADGGPQASLSTVSSPPEVPLYRLAYFNKPEISVLLMGTIAAVLNGAIMPTFGLLISKMISIFYKPADELRHDSKVWAMVFVAVGVASLLVIPCRYYFFGIAGGKLIQRIRKMCFEKVVYMEVNWFDEVEHSSGALGARLSTDAALVRALVGDALGLLAENIATSITGLVIAFEASWQLAFIVLALAPLLGLDGYVQVKFLKGFSADAKKLYEEASQVANDAVGCIRTVSSFCAEEKVMELYEQKCEGPIKKGIRRGIISGLGFGLSCFLLYAVYACCFYAGARLVEDGKSTFSDVFLVIFALGMAASGVSQLGTLVPDLINAKSATASIFAILDQKSQIDSSDESGMTLEEVKGEIEFNHVSFKYPTRPDVQIFKDLCLNIHSGKTVALVGESGSGKSTVMSLLQRFYDPNLGHITLDGKEIQRLQLKWLRQQMGLVSQEPVLFNDTVRANIAYGKGGDATEAEIVAAAELANAHQFISSLQKGYDTIVGERGIQLSGGQKQRVAIARALVKNPKILLLDEATSALDAESEKVVQDALDCVMVDRTTIIVAHRLSTIKGADLIAVVKNGVISEKGKHEALLHKGGDYASLAALHTSASTS* 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2429 1278 Pfam ABC transporter 395 543 IPR003439 GO:0005524
Mtr4g2429 1278 Pfam ABC transporter 1053 1202 IPR003439 GO:0005524
Mtr4g2429 1278 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 713 999 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr4g2429 1278 Pfam ABC transporter transmembrane region 712 980 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr4g2429 1278 Pfam ABC transporter transmembrane region 54 327 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr4g2429 1278 CDD ABC_6TM_Pgp_ABCB1_D2_like 702 1017 - -
Mtr4g2429 1278 ProSitePatterns ABC transporters family signature. 515 529 IPR017871 GO:0005524
Mtr4g2429 1278 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1034 1271 IPR003439 GO:0005524
Mtr4g2429 1278 CDD ABC_MTABC3_MDL1_MDL2 1034 1269 - -
Mtr4g2429 1278 Gene3D ABC transporter type 1, transmembrane domain 99 996 IPR036640 GO:0005524|GO:0016021
Mtr4g2429 1278 Gene3D - 374 627 IPR027417 -
Mtr4g2429 1278 ProSitePatterns ABC transporters family signature. 1174 1188 IPR017871 GO:0005524
Mtr4g2429 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 614 IPR027417 -
Mtr4g2429 1278 CDD ABC_6TM_Pgp_ABCB1_D1_like 54 337 - -
Mtr4g2429 1278 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 376 612 IPR003439 GO:0005524
Mtr4g2429 1278 SMART AAA_5 1061 1254 IPR003593 -
Mtr4g2429 1278 SMART AAA_5 403 589 IPR003593 -
Mtr4g2429 1278 SUPERFAMILY ABC transporter transmembrane region 41 358 IPR036640 GO:0005524|GO:0016021
Mtr4g2429 1278 Gene3D - 1024 1277 IPR027417 -
Mtr4g2429 1278 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 21 1274 - -
Mtr4g2429 1278 PANTHER - 21 1274 - -
Mtr4g2429 1278 MobiDBLite consensus disorder prediction 13 29 - -
Mtr4g2429 1278 SUPERFAMILY ABC transporter transmembrane region 700 1014 IPR036640 GO:0005524|GO:0016021
Mtr4g2429 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1023 1270 IPR027417 -
Mtr4g2429 1278 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 55 341 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr4g2429 1278 CDD ABC_MTABC3_MDL1_MDL2 376 614 - -
Mtr4g2429 1278 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2429 Mtr-Chr4 37910010 37916005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2429 37 1277 Calmodulin-binding Proteins AT2G36910 43.211 0.0 1023