Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2426 ATGGCTTCTGCTGCAAATTTCAACTTTGAAATCACCCAAAACAACATGATCACTCAACACCCTCATTGGTATTCATCAAAAACTGGAATTTACAACAGTATACATACTCCTAGAAATCTTCCAACTGACCCTTTTCTTGACATTGTTTCCTTCATTTTTTCACACTCTCATGATGGGGTTTTAGCCCTTATTGATTCTTCATCTGGGTCTTCCATTTCTTACTCAAAGTTGTTACCTTTAGTCAAATCCATGGCTTCTGCTTTACACAAAATGGGTGTTTCACAAGGTGATGTTGTTTTGCTTCTACTTCCAAATTCAATTTATTACCCTGTTATACTATTGGCTGTTCTGTATTTAGGTGCTGTTTTTACACCATTGAATCCTCTTAGTAGTGTTGGCGAAATTCGTAAACAGGTTCAAGAGTGTGGTGTGAGTTTTGCTTTTACTATACCTGAAAATGTCAAGAAACTAGAGCTATTAGGTGGCATTAATCCCATTATTGCTGTGCCAGAAAATGAGAAGGATTTGAGGAATGACGGTTTCTCAAGTTTCTTTAACCTTCTTTATGGTAAATTTGATTTGCCTCAAAGGGTAGTTATTAAACAGGAAGATACTGCTGGTATATTGTATTCATCTGGGACTACAGGTGTGAGTAAAGGAGTTGTTTTAACTCATAGAAATCTTATTTCTATGGTTGAGCTTTTTGTGAGATTTGAAGCTTCTCAATATGATTACTCTTGTTCCAAGAGTGTGTTTCTAGCTGTTTTGCCAATGTTTCATGTGTATGGTTTATCGCTCTTTGCTGCGGGATTGTTGTCGTTGGGCTCTACAGTCATTGTAATGAGGAAATTTGACATTGACGAGGTTATTAGGGTGATTGACAAATATAATGTTACACACTTTCCTGTTGTTCCACCGATGTTGTCGGCATTGACAATGAAGGCAAAGGGTGTTAATGGAATTAAGTTGCAGAGTTTGAGACAGGTCTCTTGCGGTGCAGCGCCTTTGAGCATAGGAGTTATTAGTAGTTTTGTCCATGCTTTCCCTAACGTTGATTTTATACAGGGTTATGGAATGACCGAGTCGACTGCAGTGGGAACACGTGGCTTCAATACTGAAAAGTTTCACAACTATTCGTCAATAGGGTTGTTGGCTCCAAACACGGAGGCAAAAGTGGTAGACTGGAACAATGGTACTTTTTTGCCCCCAGGCAGCTGCGGTGAGCTTTGGTTGAGAGGGCCTTCTATTATGAGAGGATACTTGAATAATGAGGAAGCTACTATATCAACAATTGATAAAGATGGTTGGCTACATACAGGAGATATTGTTTATTTTGATCAGGATGGATATTTACATCTGGCTGACCGCTTGAAAGACATTATCAAATACAAGGGATTTCAGATTGCTCCTGCTGATTTAGAAGCCGTGTTAATTTTGCATCCTGAAATAATTGATGCAGCTGTTACAGCTGCCGAAGATGAAGAAATTGGGGAAATTCCAGTGGCGTTTGTTGTCAAGAAGGTTGGAAGTGTACTTTCTCCGAAGGATGTGGTCAATTATGTTGCTGAGCAGGTTGCTCCATACAAGAAAGTCCGGAAGGTGTTCTTCACCGACAAGATACCAAGGTCTCCGACTGGGAAGATCCTCCGAAAGCAACTCAGGCACTGCTTGACTTCTAAACTCTAA 1686 0.3974 MASAANFNFEITQNNMITQHPHWYSSKTGIYNSIHTPRNLPTDPFLDIVSFIFSHSHDGVLALIDSSSGSSISYSKLLPLVKSMASALHKMGVSQGDVVLLLLPNSIYYPVILLAVLYLGAVFTPLNPLSSVGEIRKQVQECGVSFAFTIPENVKKLELLGGINPIIAVPENEKDLRNDGFSSFFNLLYGKFDLPQRVVIKQEDTAGILYSSGTTGVSKGVVLTHRNLISMVELFVRFEASQYDYSCSKSVFLAVLPMFHVYGLSLFAAGLLSLGSTVIVMRKFDIDEVIRVIDKYNVTHFPVVPPMLSALTMKAKGVNGIKLQSLRQVSCGAAPLSIGVISSFVHAFPNVDFIQGYGMTESTAVGTRGFNTEKFHNYSSIGLLAPNTEAKVVDWNNGTFLPPGSCGELWLRGPSIMRGYLNNEEATISTIDKDGWLHTGDIVYFDQDGYLHLADRLKDIIKYKGFQIAPADLEAVLILHPEIIDAAVTAAEDEEIGEIPVAFVVKKVGSVLSPKDVVNYVAEQVAPYKKVRKVFFTDKIPRSPTGKILRKQLRHCLTSKL* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2426 561 Gene3D - 459 559 IPR045851 -
Mtr4g2426 561 ProSitePatterns Putative AMP-binding domain signature. 208 219 IPR020845 -
Mtr4g2426 561 CDD 4CL 40 553 - -
Mtr4g2426 561 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 560 - -
Mtr4g2426 561 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 17 560 - -
Mtr4g2426 561 Gene3D - 32 458 IPR042099 -
Mtr4g2426 561 Pfam AMP-binding enzyme 59 463 IPR000873 -
Mtr4g2426 561 SUPERFAMILY Acetyl-CoA synthetase-like 57 556 - -
Mtr4g2426 561 Pfam AMP-binding enzyme C-terminal domain 473 547 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2426 Mtr-Chr4 37887642 37891722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2426 21 561 Monolignol Biosynthesis Gene Families AT4G19010 60.773 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2426 K01904 - gmx:100804808 859.366