Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2420 ATGGCTTCCATTTTCAAAGCTGCCTCACACCCACTTTTACTTTGCTTGATTCTTTTCTCTGCCTCCCAAATCTTGGTCATCAACTGTACTGAATTTGAAGTTGGCGGTAGAATTGGTTGGGTTGTTCCTGACTCAAAGGACAAAGATGATATGTACAACCAATGGGCTTCCCAAAATAGATTCAAAATTGATGACACTGTCCATTTCAAATACGAGAAAGATTCAGTGATGGTGGTGAATGAAGAAGAGTATGAACAATGCAAATCTACTCGTCCATTATTTTTTGGCAACAATGGCAACACAGTTTTCAAATTTGAGCGACCAGGAATGTTCTACTTCATCAGTGGAGTTAGTGGTCATTGTACAAGAGGCCAGAAAATGATCATCAAGGTTTTGGATGTCGAACCAATTACAGCAGCATCACCACAATCTGCAAATGAGAGTGCACCAATAGCACAGCATTCTAAAGCTGCTCAAATTACTCCTATTACTATCACATCATTCACACTCTTTACTTTGTCAATCCTGGGCATATGCTTGAAATACTAG 549 0.3953 MASIFKAASHPLLLCLILFSASQILVINCTEFEVGGRIGWVVPDSKDKDDMYNQWASQNRFKIDDTVHFKYEKDSVMVVNEEEYEQCKSTRPLFFGNNGNTVFKFERPGMFYFISGVSGHCTRGQKMIIKVLDVEPITAASPQSANESAPIAQHSKAAQITPITITSFTLFTLSILGICLKY* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2420 182 CDD OsENODL1_like 30 132 IPR041846 -
Mtr4g2420 182 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Mtr4g2420 182 Pfam Plastocyanin-like domain 50 125 IPR003245 GO:0009055
Mtr4g2420 182 PANTHER BLUE COPPER PROTEIN 13 144 IPR039391 GO:0009055
Mtr4g2420 182 Gene3D - 29 137 IPR008972 -
Mtr4g2420 182 ProSiteProfiles Phytocyanin domain profile. 30 133 IPR003245 GO:0009055
Mtr4g2420 182 PANTHER EARLY NODULIN-LIKE PROTEIN 5 13 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2420 Mtr-Chr4 37825338 37826573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2420 12 173 Phytocyanin Superfamily AT1G48940 46.199 5.02e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2420 - - mtr:MTR_4g112310 233.032