Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2417 ATGGCTTACATGTGCGCTGACAGTGGAAACCTGATGGCAATAGCTCAACAAGTCATCAACCAAAAACAACAACAAGAACAACATGAACAACAACAACATCAACATCATCATCATCACCAAAACATCCTAGGTATCACAAATCCTCTCTCTGTCTCACTACATCCATGGCACAACAACAACATTCCAGTATCCTCTTCTACATCACTGCCACCTTTGTCTTTTCCACCTACCGATTTCACCGACCCATTTCAAGTCGGGTCGGGTCCTGAAAACACCGATCCCGCTTTCAATTTCCCTTCACCACTCGACCCTCACTCCACCACCTTCCGTTTCTCCGATTTCGACTCCGACGACTGGATGGATACCTTAATGTCCGCCGCCGACAGCCACTCCGATTTCCATCTCAACCCGTTTTCATCCTGCCCGACCCGGCTCTCTCCACAACCGGATCTTCTCCTACCCGCCACTGCACCGCTTCAAATCCCAACCCAACCACCCACTCCACAACGAAAAAACGACAACACCACCACCGAAACGACATCGTCGTTTTCATCTTCCACAAACCCACTTCTAAAAACCCTAACAGAAATCGCTTCTTTAATCGAAACCCAAAAACCAAATCAAGCCATTGAAACCCTAACCCATCTTAACAAATCAATTTCACAAAACGGAAACCCTAATCAACGAGTTTCCTTCTATTTCTCACAAGCTTTAACCAACAAAATCACCGCACAATCTTCAATAGCTTCTTCAAATTCTTCTTCTACTACATGGGAAGAGTTAACACTCTCTTACAAAGCTCTAAACGATGCATGCCCATATTCAAAGTTCGCACATTTAACAGCAAATCAAGCGATTCTCGAAGCAACAGAAGGATCCAACAACATTCATATAGTTGATTTTGGAATTGTTCAAGGGATTCAATGGGCTGCATTGTTACAAGCATTTGCAACTCGTTCTTCTGGTAAACCTAATAGTGTAAGAATTTCTGGTATACCTGCTATGGCTTTAGGCACTTCACCAGTTTCATCGATTTCAGCTACCGGTAATCGTTTATCTGAGTTTGCAAAACTTCTAGGGTTAAATTTCGAATTTACACCGATTCTTACACCTATCGAGCTTCTTGATGAATCAAGCTTTTGTATTCAACCAGACGAGGCTTTAGCTGTTAATTTCATGCTTCAGTTGTATAATCTTTTGGATGAGAACACGAATTCAGTTGAAAAAGCGCTTCGTTTGGCGAAATCATTGAATCCTAAGATTGTTACTTTAGGTGAATATGAAGCTAGTTTGACTACTCGGGTTGGTTTTGTTGAAAGATTTGAAACTGCTTTTAATTATTTTGCTGCTTTTTTTGAGAGTTTGGAGCCGAATATGGCGTTGGATTCACCCGAGAGGTTTCAAGTGGAGAGTCTTTTGCTTGGTAGGAGAATTGATGGTGTGATTGGTGTGAGGGAGAGGATGGAGGATAAAGAACAGTGGAAGGTTTTGATGGAAAACTGTGGTTTTGAATCAGTGGGTTTGAGTCATTATGCAATTAGTCAAGCTAAGATATTGTTGTGGAATTATAGTTATAGTTCTTTGTATTCTCTTGTTGAATCTCAACCTGCTTTTTTGTCTCTGGCTTGGAAAGATGTTCCTCTATTGACTGTTTCTTCTTGGCGTTGA 1668 0.4167 MAYMCADSGNLMAIAQQVINQKQQQEQHEQQQHQHHHHHQNILGITNPLSVSLHPWHNNNIPVSSSTSLPPLSFPPTDFTDPFQVGSGPENTDPAFNFPSPLDPHSTTFRFSDFDSDDWMDTLMSAADSHSDFHLNPFSSCPTRLSPQPDLLLPATAPLQIPTQPPTPQRKNDNTTTETTSSFSSSTNPLLKTLTEIASLIETQKPNQAIETLTHLNKSISQNGNPNQRVSFYFSQALTNKITAQSSIASSNSSSTTWEELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFMLQLYNLLDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVRERMEDKEQWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSWR* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2417 555 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 192 554 IPR005202 -
Mtr4g2417 555 MobiDBLite consensus disorder prediction 157 187 - -
Mtr4g2417 555 MobiDBLite consensus disorder prediction 65 101 - -
Mtr4g2417 555 MobiDBLite consensus disorder prediction 166 187 - -
Mtr4g2417 555 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 192 554 - -
Mtr4g2417 555 MobiDBLite consensus disorder prediction 19 41 - -
Mtr4g2417 555 ProSiteProfiles GRAS family profile. 181 555 IPR005202 -
Mtr4g2417 555 Pfam GRAS domain family 191 555 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2417 Mtr-Chr4 37788322 37790809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2417 1 555 GRAS Transcription Factor Family AT5G66770 53.707 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr4g2417 GRAS 1.6e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2417 - - adu:107477343 639.802