Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2398 ATGGAAGAATCAACTAGGTGGATGATACACACTTCACTTTTTCTCTTCACATTTATCTTCCTTCTCAAAATCACACTAAAGAAATTATCCAAGCACAAAAACCTCCCTCCTTCTCCACCTTCTTTACCATTTATAGGTCATCTTCATCTCATCAAAGAACCCTTACACCGTAGCCTCCACAAGCTTGCACAAATCTATGGCCATATCTTCTTTCTCCGTGTAGGGACACGCAACATGCTTGTTGTTTCTTCACCTTCTGCTGTAGAAGAATGTTTGTCAAAAAATGATATTACATTTGCAAACCGTACTTCCCATACACTTGCCGGAAAATATCTCAATTACAATAATACGGCGTTAGGGTTTTCTCCCTACGGTGAACTTCATCGCAAATTGCGTCGTTTAACAACAACAGAACTTTTCTCCACCAATCGTCTTGCGATGTTCACAAAAGTTCGAGAAGAAGAGGTGCAATTATTAGTTAAGCAAATATTTGAAGGGTGCAAAGGAGAATTGTTGTCTAAGGTTGACCTTAAAAGAAAATGTTTAGAACTTTCTTTCAATATTATGTTGAGAGTGATTTCAGGGAAACGATACTATGGTGAGGATGCAGTTGCCTTAGAAGCAAAGGAGTTTCAGATTTTAATGAATGAGTATGTAGAGCTTCTTGGAAATGGAAATTTGAATGATTGTTTTCCAATATTAAAATGGATTGATTTTCAAGGGAAGAAAGAGAAAATGATAAACTTGATGAAAAAGATGGATGCCTTCCTTCAGAAGCTACTTGATGAGAAACGAAGAAATTGGTGCAATGACCAAAAAAATATGACGTTGATTGATGTTATGTTAGACTTGCAACAAAAGGAGCCAGAATTCTACACGCATGAAATAGTGAAAGGCGTTGTTTTGGTAATACTTGTAGCTGGCTCTGAGCCATCGGCTACAACCATGGAATGGGCACTCTCACTTCTCCTCAACCATCCAGAAACAATGAATAAGGTAAGGGCTGAAATAGACACTTGTGTGGGACAAGATAAACTTGTGAATGAATCAGATGCTTCAAAACTAAAATACTTGCAAATGGTACTTATGGAGACACTTCGTTTATACCCTCCAGCTCCACTAATGTTACCACACGAATCCTCCAATGATTGCAATGTTTGTGGTTTTGATATACCAAAAGGGACAATGCTTCTTGTGAATCTTTGGGCCCTACATAGAGACCCTAACTTATGGAAAGATCCAACAAGGTTTGTGCCAGAGAGATTTGAAGAAGGGGAATTAGGTGGTGGTGAAATTTATAATATGATTCCATTTGGTGTTGGAAGGAGATCTTGTCCTGGAGCTGCTTTAGCAAAACGTTTTATTGGACATGCAATAGGATCTTTGATTCAATGCTTTGAGTGGGAGAGAATTGGAGATGAAGAAATTGACATGAATGAGGGAATAGGGCTTACAATGCCTAAAGTTGAACCTTTGGTTGCCTTATGCAAGCCACGCCAAGTTATGGTAGAAGTTATCTCAAATATATAA 1530 0.3824 MEESTRWMIHTSLFLFTFIFLLKITLKKLSKHKNLPPSPPSLPFIGHLHLIKEPLHRSLHKLAQIYGHIFFLRVGTRNMLVVSSPSAVEECLSKNDITFANRTSHTLAGKYLNYNNTALGFSPYGELHRKLRRLTTTELFSTNRLAMFTKVREEEVQLLVKQIFEGCKGELLSKVDLKRKCLELSFNIMLRVISGKRYYGEDAVALEAKEFQILMNEYVELLGNGNLNDCFPILKWIDFQGKKEKMINLMKKMDAFLQKLLDEKRRNWCNDQKNMTLIDVMLDLQQKEPEFYTHEIVKGVVLVILVAGSEPSATTMEWALSLLLNHPETMNKVRAEIDTCVGQDKLVNESDASKLKYLQMVLMETLRLYPPAPLMLPHESSNDCNVCGFDIPKGTMLLVNLWALHRDPNLWKDPTRFVPERFEEGELGGGEIYNMIPFGVGRRSCPGAALAKRFIGHAIGSLIQCFEWERIGDEEIDMNEGIGLTMPKVEPLVALCKPRQVMVEVISNI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2398 509 PANTHER CYTOCHROME P450 82C3-RELATED 2 508 - -
Mtr4g2398 509 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Mtr4g2398 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 508 - -
Mtr4g2398 509 Pfam Cytochrome P450 36 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 Gene3D Cytochrome P450 25 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2398 509 SUPERFAMILY Cytochrome P450 36 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2398 Mtr-Chr4 37559244 37563506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2398 11 506 Cytochrome P450 AT4G37320 45.850 3.67e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2398 - - gmx:100794610 688.723