Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2386 ATGGAGATAGAGCAAGACAATGCCAAAGACAATAGTAAAGGTGTTAGCAACCCTATTGAAATGATGAGAGGTTCAAAAAGAGGGATGCATCTTGTGTGGGAAGATTTGAGTGTTGTAATTCCAAACTTTGGCAATGGACATACAAGAAGATTGCTTAATGGTTTGAATGGATATGTTGAACCAAACAGAATCATGGCTATTATGGGTCCATCTGGTTCTGGAAAATCTACTCTTCTTGATGCTTTGGCAGGTAGACTCTCTGGAAATGTTATCATGTCTGGTAATGTGCTTTTAAATGGAAAGAAAAGGAGATTAGACTATGGGGTTGTAGCTTATGTGACACAAGAAGACATATTGTTGGGAACACTAACAGTGAGAGAGACAATATCTTACTCAGCAAATTTAAGGCTTCCAGCTACAATGACAAAAGAAGAGGTAAATGACATTGTAGAAGGAACAATAATGGAGATGGGTCTTCAAGATTGTGCTGATAGACTTATAGGAAATTGGCACTTAAGAGGTATAAGTGGTGGAGAAAAGAAAAGAACTAGCATAGCACTTGAAATTCTTACTAGGCCATGTCTCTTGTTCCTTGATGAGCCAACAAGTGGTTTGGACAGTGCCTCAGCATATTTTGTTGCTCAAACTTTGAGAAACATTGCTCATGATGGGAAAACTGTTATTTCTTCAATTCATCAACCAAGTAGTGAGGTTTTTGCATTATTTGATGATCTATTTCTACTTTCTGGGGGTCAAACAATTTACTTTGGACCAGCTGAAAATGCAGTTGAGTTCTTTGGCAAAGCAGGATTCCCATGTCCAAGTAGAAGAAACCCTTCAGATCATTTCCTACGTTGTATTAATTCAGACTTTGATACTGTCACAACTACTATGATGTCCTCCGGGAGAACACATGAGCCAAAAACATTGGCACCACCAACAATGAACTTATCAACAGCAGAAATCAAAGCAATACTCATAGAGAAATACCGTTGGTCAGAATATGCAACTTGTGCAAGAGCAAGAATCAAACAAATCTCAAATTTTGAAGGACATAATTATGAAAGTAAAAGCAAGAGCCAAGCCAAATGGTTGAAGCAACTATCAACTTTGACTCATAGATCTTTTGTCAACATGTCTAGAGATGTAGGGTACTATTGGATAAGGTTAACAATCTATGTCGCCTTATCTTTGTGTGTCGGAACAATCTTTTATGACATTGGATCAAGTTATACAGCCATTTTAGCAAGAGGAGCATGTGGCGCTTTTATCTCGGGTTTCATGACATTCATGTCCATAGGAGGATTCCCATCATTCATAGAGGAAATGAAGGTCTTCTACAAAGAAAGGCTGAATGGATATTATGGAATTGCAGTCTACATTCTGTCAAATTTTCTCTCTTCATTTCCTTTTATAGCAGTGATGTCATTTGCTACAGGGTCTATAACATATTACATGGTTAAGTTTCGTTCTGAGTTTTCGCATCTTTTGTATATCTGTTTGGATCTTTTGGGCTGTATAGCTGTTGTGGAGAGCTCAATGATGATTATAGCTGCATTGGTTCCCAATTTTCTTATGGGATTGATAATTGGAGCAGGTTATATTGGTCTTATGATGATGACTGCTGGCTATTTCCGGCAGATTCGTGATCTTCCCAAATTCTTCTGGCGTTACCCTATTTCATACATCAATTATGGAGCATGGGGTTTGCAGGGAGCTTTCAAGAATGATATGATTGGGATGGAGTTTGATCCTGAAAACCCTGGTGAGCCAAAACTGAAAGGAGAAATCATCCTCAAAACATTGCTTGGAATGAAAGTTGATTATTCAAAATGGTGGGACCTAGCTGTGGTCATCTTCATCCTCATGTTGCATAGAGTTATTTTCTTTTTCATTCTCAAATTTAAGGAGAGAGTTGTACCTTTCCTTCACAGTATCTACACAAAGCAAACACTGCGACGTATCAAGAAGCGGGCATCGTTCAGGAAAACGCCATCGTTCGCTTCCAAGAGACACCAACCATTGCATCCATTGTCTTCTCAGGAGGGTCTCAACTCTCCATTTCATTAG 2070 0.387 MEIEQDNAKDNSKGVSNPIEMMRGSKRGMHLVWEDLSVVIPNFGNGHTRRLLNGLNGYVEPNRIMAIMGPSGSGKSTLLDALAGRLSGNVIMSGNVLLNGKKRRLDYGVVAYVTQEDILLGTLTVRETISYSANLRLPATMTKEEVNDIVEGTIMEMGLQDCADRLIGNWHLRGISGGEKKRTSIALEILTRPCLLFLDEPTSGLDSASAYFVAQTLRNIAHDGKTVISSIHQPSSEVFALFDDLFLLSGGQTIYFGPAENAVEFFGKAGFPCPSRRNPSDHFLRCINSDFDTVTTTMMSSGRTHEPKTLAPPTMNLSTAEIKAILIEKYRWSEYATCARARIKQISNFEGHNYESKSKSQAKWLKQLSTLTHRSFVNMSRDVGYYWIRLTIYVALSLCVGTIFYDIGSSYTAILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERLNGYYGIAVYILSNFLSSFPFIAVMSFATGSITYYMVKFRSEFSHLLYICLDLLGCIAVVESSMMIIAALVPNFLMGLIIGAGYIGLMMMTAGYFRQIRDLPKFFWRYPISYINYGAWGLQGAFKNDMIGMEFDPENPGEPKLKGEIILKTLLGMKVDYSKWWDLAVVIFILMLHRVIFFFILKFKERVVPFLHSIYTKQTLRRIKKRASFRKTPSFASKRHQPLHPLSSQEGLNSPFH* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2386 689 Pfam ABC-2 type transporter 367 575 IPR013525 GO:0016020|GO:0140359
Mtr4g2386 689 MobiDBLite consensus disorder prediction 663 689 - -
Mtr4g2386 689 SMART AAA_5 61 260 IPR003593 -
Mtr4g2386 689 MobiDBLite consensus disorder prediction 673 689 - -
Mtr4g2386 689 Gene3D - 21 269 IPR027417 -
Mtr4g2386 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 26 684 - -
Mtr4g2386 689 CDD ABCG_EPDR 28 257 - -
Mtr4g2386 689 Pfam ABC transporter 52 203 IPR003439 GO:0005524
Mtr4g2386 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 272 IPR027417 -
Mtr4g2386 689 Pfam ABC-2 type transporter 232 289 IPR043926 GO:0140359
Mtr4g2386 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 275 IPR003439 GO:0005524
Mtr4g2386 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 26 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2386 Mtr-Chr4 37452626 37459269 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2386 50 246 Calmodulin-binding Proteins AT2G36910 30.876 7.21e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2386 K05681 - gmx:100806806 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2386 4 37452626 37459269 Mtr4g2386 4 37452626 37459269 ECH